RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
ACTN1-207ENST00000553290 SPEGQ15772 3267 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 KMT2BQ9UMN6 2715 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 NEMP1O14524 444 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 LRCH4O75427 683 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 UGT2B4P06133 528 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 PCK1P35558 622 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 HCAR3P49019 387 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 BNIP3Q12983 259 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 SGCGQ13326 291 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 PIGHQ14442 188 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 GRM3Q14832 879 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 GDPD4Q6W3E5 623 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 ABI3BPQ7Z7G0 1075 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 DCP2Q8IU60 420 aaKnown RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 KDF1Q8NAX2 398 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 KCTD15Q96SI1 283 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 CPEB1Q9BZB8 566 aaKnown RBP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 ZWILCHQ9H900 591 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 FZD3Q9NPG1 666 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
ACTN1-207ENST00000553290 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
ACTN1-207ENST00000553290 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 A6NNZ2 444 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 PRAMEF11O60813 436 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 LDOC1O95751 146 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-207ENST00000553290 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-207ENST00000553290 GYPCP04921 128 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 ERCC2P18074 760 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 ABL2P42684 1182 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 CYTH1Q15438 398 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 BOLA3Q53S33 107 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 PPP6R3Q5H9R7 873 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-207ENST00000553290 GCNT7Q6ZNI0 430 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 TTC7BQ86TV6 843 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 LZTR1Q8N653 840 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 EID2Q8N6I1 236 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 HCAR2Q8TDS4 363 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 ASB12Q8WXK4 309 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 CELF6Q96J87 481 aaKnown RBP13.13□□□□□ -0.31
ACTN1-207ENST00000553290 LENG8Q96PV6 779 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-207ENST00000553290 C1QTNF2Q9BXJ5 285 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 CALN1Q9BXU9 219 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 SLC39A8Q9C0K1 460 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 PDFQ9HBH1 243 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 DKK3Q9UBP4 350 aa13.13□□□□□ -0.31
ACTN1-207ENST00000553290 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 A0A087X0T9 212 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 J3KR12 359 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 ENC1O14682 589 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 AREL1O15033 823 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 FAM228BP0C875 321 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 CDK4P11802 303 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 ARL4AP40617 200 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 SUOXP51687 545 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 CLDN2P57739 230 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 FGL2Q14314 439 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 DPYSL2Q16555 572 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 AFMIDQ63HM1 303 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 KYAT3Q6YP21 454 aaKnown RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 Q6ZSR6 202 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 TMPRSS7Q7RTY8 843 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 KANSL1Q7Z3B3 1105 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 CNDP2Q96KP4 475 aaKnown RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 BMFQ96LC9 184 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 THAP2Q9H0W7 228 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 CWC15Q9P013 229 aaKnown RBP13.12□□□□□ -0.31
ACTN1-207ENST00000553290 LHX3Q9UBR4 397 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 PTPRBP23467 1997 aa13.12□□□□□ -0.31
ACTN1-207ENST00000553290 H3BRJ5 948 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 FPGTO14772 594 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 PALMO75781 387 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 CYP1A2P05177 515 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 C1SP09871 688 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 XPAP23025 273 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-207ENST00000553290 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
ACTN1-207ENST00000553290 CASP14P31944 242 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 RABIFP47224 123 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 CSNK1DP48730 415 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms