RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 NANOS1Q8WY41 292 aaKnown RBP12.65□□□□□ -0.38
SNRPF-204ENST00000552085 CENPTQ96BT3 561 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 ALG14Q96F25 216 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 NUDT22Q9BRQ3 303 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 PANK2Q9BZ23 570 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 APOBEC3GQ9HC16 384 aaKnown RBP12.65□□□□□ -0.38
SNRPF-204ENST00000552085 CNGB3Q9NQW8 809 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 MAP10Q9P2G4 905 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 IL36AQ9UHA7 158 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 XPO7Q9UIA9 1087 aaKnown RBP12.65□□□□□ -0.38
SNRPF-204ENST00000552085 KCND3Q9UK17 655 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 POLHQ9Y253 713 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 TLR6Q9Y2C9 796 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 PCDHB3Q9Y5E6 796 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 MRPS18BQ9Y676 258 aaKnown RBP12.65□□□□□ -0.38
SNRPF-204ENST00000552085 OAS3Q9Y6K5 1087 aaKnown RBP12.65□□□□□ -0.38
SNRPF-204ENST00000552085 DNHD1Q96M86 4753 aa12.65□□□□□ -0.38
SNRPF-204ENST00000552085 HEATR9A2RTY3 570 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 B4E171 279 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TOR1BO14657 336 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 B4GAT1O43505 415 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 NUDT21O43809 227 aaKnown RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 RASGRP1O95267 797 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 CD2BP2O95400 341 aaKnown RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 SRCP12931 536 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TSPAN7P41732 249 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 RAB15P59190 212 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 DLG4P78352 724 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 AMPD3Q01432 767 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 CENPCQ03188 943 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TESK1Q15569 626 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 CLPPQ16740 277 aaPredicted RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 ALG11Q2TAA5 492 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 AMZ1Q400G9 498 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 FAM26FQ5R3K3 315 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 ANKS6Q68DC2 871 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 SPNS3Q6ZMD2 512 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 CIR1Q86X95 450 aaPredicted RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TMEM174Q8WUU8 243 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TSACCQ96A04 125 aaPredicted RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 SLC39A13Q96H72 371 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TEFMQ96QE5 360 aaKnown RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 NIF3L1Q9GZT8 377 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
SNRPF-204ENST00000552085 DIDO1Q9BTC0 2240 aaKnown RBP12.64□□□□□ -0.39
SNRPF-204ENST00000552085 TCAF2A6NFQ2 919 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 F5H5T6 163 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 TSPAN6O43657 245 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 LEFTY1O75610 366 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 FURINP09958 794 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 L1CAMP32004 1257 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 CSTF2P33240 577 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNRPF-204ENST00000552085 LIMK2P53671 638 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 NR6A1Q15406 480 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 RD3Q7Z3Z2 195 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 ATP11CQ8NB49 1132 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 GOLGA5Q8TBA6 731 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 RTP4Q96DX8 246 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 SERPINB11Q96P15 392 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 TRIT1Q9H3H1 467 aaKnown RBP12.63□□□□□ -0.39
SNRPF-204ENST00000552085 OCIAD1Q9NX40 245 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
SNRPF-204ENST00000552085 OR51B4Q9Y5P0 310 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 SPG11Q96JI7 2443 aa12.63□□□□□ -0.39
SNRPF-204ENST00000552085 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 CBX6O95503 412 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 MT-CO1P00395 513 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 LTFP02788 710 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 LCP1P13796 627 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 PGDP52209 483 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 RAD23BP54727 409 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 OR1D5P58170 312 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 BST2Q10589 180 aaKnown RBP12.62□□□□□ -0.39
SNRPF-204ENST00000552085 NNTQ13423 1086 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 ERV3-1Q14264 604 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 E2F4Q16254 413 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 TTC39BQ5VTQ0 682 aaPredicted RBP12.62□□□□□ -0.39
SNRPF-204ENST00000552085 FAM129CQ86XR2 697 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
SNRPF-204ENST00000552085 SFTPA2Q8IWL1 248 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 FAM46DQ8NEK8 389 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 OR52K2Q8NGK3 314 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 RRN3Q9NYV6 651 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 VPS28Q9UK41 221 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 ANKRD36A6QL64 1941 aa12.62□□□□□ -0.39
SNRPF-204ENST00000552085 CCDC168Q8NDH2 2452 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms