RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
ERBB3-216ENST00000550869 SDK1Q7Z5N4 2213 aa12.29□□□□□ -0.44
ERBB3-216ENST00000550869 CFAP47Q6ZTR5 3102 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 TRIM24O15164 1050 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 METTL18O95568 372 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 IFNB1P01574 187 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 CR2P20023 1033 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 TNFRSF8P28908 595 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 PMLP29590 882 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 RPL21P46778 160 aaKnown RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 SLC6A11P48066 632 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 DGKGP49619 791 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 DGKEP52429 567 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 SHC2P98077 582 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 SULT2A1Q06520 285 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 MESP2Q0VG99 397 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 CBLBQ13191 982 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 CYTH1Q15438 398 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 TRADDQ15628 312 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 ST3GAL2Q16842 350 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 KCTD19Q17RG1 926 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 GEN1Q17RS7 908 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 PARP6Q2NL67 630 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 HSF5Q4G112 596 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 USP39Q53GS9 565 aaKnown RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 MARC1Q5VT66 337 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 CCDC70Q6NSX1 233 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 WDR93Q6P2C0 686 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 PGBD5Q8N414 524 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 NAT16Q8N8M0 369 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 USP33Q8TEY7 942 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 TADA1Q96BN2 335 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 PSKH2Q96QS6 385 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 MGME1Q9BQP7 344 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 GORASP1Q9BQQ3 440 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 EPB41L5Q9HCM4 733 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 DNAJC17Q9NVM6 304 aaKnown RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.442e-10■■■■□ 24.2
ERBB3-216ENST00000550869 GRHL1Q9NZI5 618 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 WHRNQ9P202 907 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 UBA2Q9UBT2 640 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 VPS28Q9UK41 221 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 HS3ST2Q9Y278 367 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-216ENST00000550869 ACTL7AQ9Y615 435 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
ERBB3-216ENST00000550869 PLXND1Q9Y4D7 1925 aa12.27□□□□□ -0.44
ERBB3-216ENST00000550869 CBX4O00257 560 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 DNALI1O14645 258 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 TIMM44O43615 452 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 ZNF821O75541 412 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 STK10O94804 968 aaKnown RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 SEC31AO94979 1220 aaKnown RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 MT-CO1P00395 513 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 HLA-DQB2P05538 268 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 TUBBP07437 444 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 ITIH2P19823 946 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 ECHS1P30084 290 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 ACTN2P35609 894 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 FDFT1P37268 417 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 MMP13P45452 471 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 GEMIN4P57678 1058 aaKnown RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 GUCY2DQ02846 1103 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 NSUN2Q08J23 767 aaKnown RBP eCLIP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 SEMA5AQ13591 1074 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 TRIP13Q15645 432 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 CCDC6Q16204 474 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 FAM182AQ5T1J6 154 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 RNASEH2BQ5TBB1 312 aaKnown RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 MBLAC2Q68D91 279 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 KCTD11Q693B1 232 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 NAIF1Q69YI7 327 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 RETSATQ6NUM9 610 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 PID1Q7Z2X4 250 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 METTL3Q86U44 580 aaKnown RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 RASSF3Q86WH2 238 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 ARRDC2Q8TBH0 407 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 LRRC45Q96CN5 670 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 MYO19Q96H55 970 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 FCRL5Q96RD9 977 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 PNKPQ96T60 521 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 FAM129AQ9BZQ8 928 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 GBA3Q9H227 469 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 ETNK1Q9HBU6 452 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 GLOD4Q9HC38 313 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 RXFP3Q9NSD7 469 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 DEC1Q9P2X7 70 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 SEPT3Q9UH03 358 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 MMP17Q9ULZ9 603 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 SNX24Q9Y343 169 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 V9GYY5 206 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-216ENST00000550869 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 THADAQ6YHU6 1953 aa12.27□□□□□ -0.45
ERBB3-216ENST00000550869 FRYQ5TBA9 3013 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms