RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ATP2C2O75185 946 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 NKX2-2O95096 273 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 IPO7O95373 1038 aaKnown RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 PLAUP00749 431 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 INSRRP14616 1297 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 UBA7P41226 1012 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 NRIP1P48552 1158 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 LMAN1P49257 510 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 RRP1P56182 461 aaKnown RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 UBXN2AP68543 259 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 PMPCAQ10713 525 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 HIST2H2ACQ16777 129 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 MIIPQ5JXC2 388 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 KIAA0930Q6ICG6 404 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 LRRC8EQ6NSJ5 796 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 FAM47EQ6ZV65 393 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 TTLL10Q6ZVT0 673 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 IGFN1Q86VF2 1251 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 CMASQ8NFW8 434 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 ZFPM2Q8WW38 1151 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 EFHD1Q9BUP0 239 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 GATA5Q9BWX5 397 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 IFIH1Q9BYX4 1025 aaKnown RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 KLHL4Q9C0H6 718 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 CPSF2Q9P2I0 782 aaKnown RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 SUCLA2Q9P2R7 463 aaPredicted RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 ADAM21Q9UKJ8 722 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 AAR2Q9Y312 384 aaKnown RBP6.01□□□□□ -1.45
HCFC2-204ENST00000550335 ZNF711Q9Y462 761 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 CLDN16Q9Y5I7 305 aa6.01□□□□□ -1.45
HCFC2-204ENST00000550335 POLR2AP24928 1970 aaKnown RBP6□□□□□ -1.45
HCFC2-204ENST00000550335 NPIPB8E9PQR5 432 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 SEC14L5O43304 696 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 UGDHO60701 494 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 ENTPD3O75355 529 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 TMCC1O94876 653 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 OR2C1O95371 312 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 TFP02787 698 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 HEXAP06865 529 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 PRR35P0CG20 571 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 HOXA7P31268 230 aaPredicted RBP6□□□□□ -1.45
HCFC2-204ENST00000550335 COPB2P35606 906 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 PIK3CAP42336 1068 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 FGFBP1Q14512 234 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 SYTL3Q4VX76 610 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 RPUSD3Q6P087 351 aaKnown RBP6□□□□□ -1.45
HCFC2-204ENST00000550335 LRIG3Q6UXM1 1119 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 PRPF39Q86UA1 669 aaKnown RBP6□□□□□ -1.45
HCFC2-204ENST00000550335 TBC1D26Q86UD7 250 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 TICAM1Q8IUC6 712 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 AMER2Q8N7J2 671 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 APPL2Q8NEU8 664 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 SLC9A6Q92581 669 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 NELL1Q92832 810 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 ATP6V1E2Q96A05 226 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 RITA1Q96K30 269 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 BBC3Q96PG8 261 aaPredicted RBP6□□□□□ -1.45
HCFC2-204ENST00000550335 SCNM1Q9BWG6 230 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 STRA6Q9BX79 667 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 NDST4Q9H3R1 872 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 ASAH2Q9NR71 780 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 TAB2Q9NYJ8 693 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 PLK2Q9NYY3 685 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 SLC17A6Q9P2U8 582 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 PTRH2Q9Y3E5 179 aaKnown RBP6□□□□□ -1.45
HCFC2-204ENST00000550335 FAM169AQ9Y6X4 670 aa6□□□□□ -1.45
HCFC2-204ENST00000550335 A0A1W2PQF6 199 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 NPIPB11E5RHQ5 1161 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 H7C0S8 307 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 NR2F1P10589 423 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 CYP2A6P11509 494 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-204ENST00000550335 IL11P20809 199 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 GPD1P21695 349 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 YWHAQP27348 245 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 MFAP4P55083 255 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 HDAC4P56524 1084 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 TMPRSS3P57727 454 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 CLDN2P57739 230 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 AIMP1Q12904 312 aaKnown RBP5.99□□□□□ -1.45
HCFC2-204ENST00000550335 IKQ13123 557 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-204ENST00000550335 ALG11Q2TAA5 492 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 VWA5B1Q5TIE3 1220 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 PRAMEF17Q5VTA0 474 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 TXNDC8Q6A555 127 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 FAM83HQ6ZRV2 1179 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-204ENST00000550335 KRT74Q7RTS7 529 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 ARHGEF25Q86VW2 580 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 VSIG1Q86XK7 387 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 LINC00346Q8IVM7 164 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 CCDC13Q8IYE1 715 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 CADM3Q8N126 398 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 DPP10Q8N608 796 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 AVL9Q8NBF6 648 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 OSR1Q8TAX0 266 aaPredicted RBP5.99□□□□□ -1.45
HCFC2-204ENST00000550335 NEK9Q8TD19 979 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 FRG2BQ96QU4 278 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 C1QTNF3Q9BXJ4 246 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 AAMDCQ9H7C9 122 aa5.99□□□□□ -1.45
HCFC2-204ENST00000550335 ACTR5Q9H9F9 607 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms