RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 BTNL10A8MVZ5 291 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 MEI4A8MW99 385 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 KCNK3O14649 394 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 SPOPO43791 374 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 LRP3O75074 770 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 PALMO75781 387 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 CFIP05156 583 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 TIMP2P16035 220 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 PRLRP16471 622 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 CR2P20023 1033 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 CSNK1EP49674 416 aaKnown RBP11.36□□□□□ -0.59
RAB5B-208ENST00000550283 PEX5P50542 639 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 ZNF135P52742 658 aaPredicted RBP11.36□□□□□ -0.59
RAB5B-208ENST00000550283 LBRQ14739 615 aaKnown RBP11.36□□□□□ -0.59
RAB5B-208ENST00000550283 PDK2Q15119 407 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 RSPO4Q2I0M5 234 aaPredicted RBP11.36□□□□□ -0.59
RAB5B-208ENST00000550283 LRRC38Q5VT99 294 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 SLC9A4Q6AI14 798 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 ERN2Q76MJ5 926 aaKnown RBP11.36□□□□□ -0.59
RAB5B-208ENST00000550283 LRRC8AQ8IWT6 810 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 RHOT1Q8IXI2 618 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 PLPP6Q8IY26 295 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 OR2T34Q8NGX1 318 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 FUBP1Q96AE4 644 aaKnown RBP11.36□□□□□ -0.59
RAB5B-208ENST00000550283 GDAP1L1Q96MZ0 367 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 LGMNQ99538 433 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 MYOCQ99972 504 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 CEP41Q9BYV8 373 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 C10orf88Q9H8K7 445 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 TM9SF3Q9HD45 589 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 FZD3Q9NPG1 666 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 SCML1Q9UN30 329 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 NCKAP1Q9Y2A7 1128 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 FADS3Q9Y5Q0 445 aa11.36□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3DA0A087WVF3 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3IA0A087WXS9 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3EA0A087X179 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3KA0A087X1G2 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 A0A1B0GVT2 93 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3FA6NER0 549 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3LB9A6J9 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 HAX1O00165 279 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 RAD51BO15315 384 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 LATO43561 262 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 RNGTTO60942 597 aaKnown RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 POP4O95707 220 aaKnown RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 FTCDO95954 541 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 IGSF6O95976 241 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 PRNPP04156 253 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3HP0C7X1 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ADRB3P13945 408 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ENGP17813 658 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ITGB7P26010 798 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 GARSP41250 739 aaKnown RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 SLC1A1P43005 524 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 RECQLP46063 649 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 SNRPD1P62314 119 aaKnown RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ZBTB17Q13105 803 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ZNF284Q2VY69 593 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ZNF805Q5CZA5 627 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 PRAMEF14Q5SWL7 426 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ZFYVE27Q5T4F4 411 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 FAM46CQ5VWP2 391 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 KAZNQ674X7 775 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3GQ6DHY5 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3CQ6IPX1 549 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 SLC23A3Q6PIS1 610 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 GDPD4Q6W3E5 623 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 SPOCD1Q6ZMY3 1216 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 DSG4Q86SJ6 1040 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 DAAM2Q86T65 1068 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 SRLQ86TD4 932 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 NT5DC3Q86UY8 548 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 TBC1D3Q8IZP1 549 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 LZTR1Q8N653 840 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 CNTD1Q8N815 330 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 FOXJ1Q92949 421 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 HAUS1Q96CS2 278 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 ZNF830Q96NB3 372 aaPredicted RBP11.35□□□□□ -0.59
RAB5B-208ENST00000550283 CNTNAP3BQ96NU0 1288 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 OLFM3Q96PB7 478 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 EDEM2Q9BV94 578 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 HDAC8Q9BY41 377 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 CNTNAP3Q9BZ76 1288 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 KCNF1Q9H3M0 494 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 NOD2Q9HC29 1040 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 HEY1Q9Y5J3 304 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
RAB5B-208ENST00000550283 SHROOM3Q8TF72 1996 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 hCG_1818297A0A087WSY0 165 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 A0A1W2PPC4 97 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 A0A1W2PQU0 124 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 A0A1W2PR77 199 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 GOLGA6L6A8MZA4 724 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 H0Y8X5 98 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 KCNK1O00180 336 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms