RNA–Protein interactions for RNA: ENST00000549076.1

ARFGAP1-222, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-222ENST00000549076 UBA2Q9UBT2 640 aaPredicted RBP17.16■□□□□ 0.34
ARFGAP1-222ENST00000549076 PCSK1NQ9UHG2 260 aa17.16■□□□□ 0.34
ARFGAP1-222ENST00000549076 ZFR2Q9UPR6 939 aaKnown RBP17.16■□□□□ 0.34
ARFGAP1-222ENST00000549076 A0A1W2PQJ5 194 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 ARHGAP42A6NI28 874 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 DDX3XO00571 662 aaKnown RBP eCLIP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 PAK4O96013 591 aaPredicted RBP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 SKILP12757 684 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 XPAP23025 273 aaPredicted RBP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 GKP32189 559 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 GRM3Q14832 879 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 Q6ZSR6 202 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 PTAR1Q7Z6K3 402 aaPredicted RBP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 ABI3BPQ7Z7G0 1075 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 LUZP1Q86V48 1076 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 SYN2Q92777 582 aaPredicted RBP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 GPATCH2LQ9NWQ4 482 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 IPO11Q9UI26 975 aaKnown RBP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 MFHAS1Q9Y4C4 1052 aa17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 ANKRD11Q6UB99 2663 aaPredicted RBP17.15■□□□□ 0.34
ARFGAP1-222ENST00000549076 FPGTO14772 594 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 RFPL3O75679 317 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 TPM3P06753 285 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 MIPP30301 263 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 SUOXP51687 545 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 CLDN2P57739 230 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 ACAP1Q15027 740 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 PPP6R3Q5H9R7 873 aaPredicted RBP17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 E4F1Q66K89 784 aaPredicted RBP17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 OR13H1Q8NG92 308 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 ASB12Q8WXK4 309 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 IFT43Q96FT9 208 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 C1QTNF7Q9BXJ2 289 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 C1QTNF2Q9BXJ5 285 aa17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 COL5A1P20908 1838 aaPredicted RBP17.14■□□□□ 0.33
ARFGAP1-222ENST00000549076 CHD6Q8TD26 2715 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 NEMP2A6NFY4 417 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 IGLON5A6NGN9 336 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 SDC3O75056 442 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 ALPPL2P10696 532 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 HNF1BP35680 557 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 RABIFP47224 123 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 ILKQ13418 452 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 SMAD1Q15797 465 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 DHRS13Q6UX07 377 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 KYAT3Q6YP21 454 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 GCNT7Q6ZNI0 430 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 RFX8Q6ZV50 586 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 TMPRSS12Q86WS5 348 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 DNAAF5Q86Y56 855 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 DENND6BQ8NEG7 585 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 HCAR2Q8TDS4 363 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 LENG8Q96PV6 779 aaPredicted RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 SNRNP25Q9BV90 132 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 CPEB1Q9BZB8 566 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 KLC2Q9H0B6 622 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 ISCUQ9H1K1 167 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 CCDC86Q9H6F5 360 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 LRRC19Q9H756 370 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 ZWILCHQ9H900 591 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 DKK3Q9UBP4 350 aa17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 LUC7L2Q9Y383 392 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-222ENST00000549076 ACACAQ13085 2346 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 PRAMEF11O60813 436 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 SERPING1P05155 500 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 CKMT2P17540 419 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 PCK1P35558 622 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 ABL2P42684 1182 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 HCAR3P49019 387 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 PAPOLAP51003 745 aaKnown RBP17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 HNRNPKP61978 463 aaKnown RBP eCLIP17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 ZBED6P86452 979 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 DNAJC3Q13217 504 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 CA9Q16790 459 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 BOLA3Q53S33 107 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 KANSL1Q7Z3B3 1105 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 CXorf40AQ8TE69 158 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 CPLX3Q8WVH0 158 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 CELF6Q96J87 481 aaKnown RBP17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 DNAJC28Q9NX36 388 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 SPEGQ15772 3267 aa17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 ARID1BQ8NFD5 2236 aaPredicted RBP17.12■□□□□ 0.33
ARFGAP1-222ENST00000549076 PTPRBP23467 1997 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 ZZEF1O43149 2961 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 H3BM21 787 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 H3BRJ5 948 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 AREL1O15033 823 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 LRCH4O75427 683 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 PALMO75781 387 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 JUPP14923 745 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 ERCC2P18074 760 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 DGKAP23743 735 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 ARL4AP40617 200 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 ACADVLP49748 655 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 ELP6Q0PNE2 266 aa17.11■□□□□ 0.33
ARFGAP1-222ENST00000549076 FGL2Q14314 439 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms