RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RNFT2Q96EX2 444 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 WDYHV1Q96HA8 205 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 CMTM3Q96MX0 182 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 GBP5Q96PP8 586 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 PRR25Q96S07 402 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 GPATCH1Q9BRR8 931 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 TMEM79Q9BSE2 394 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 GLOD4Q9HC38 313 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 XAB2Q9HCS7 855 aaKnown RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 CD207Q9UJ71 328 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 SLC12A4Q9UP95 1085 aa4.49□□□□□ -1.69
SCAF11-210ENST00000547654 ZFP37Q9Y6Q3 630 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-210ENST00000547654 FAM237BA0A1B0GVD1 139 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 GTPBP10A4D1E9 387 aaKnown RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 C3orf70A6NLC5 250 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TTC36A6NLP5 189 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TEX22C9J3V5 150 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 H7C1Q1 480 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TAF4O00268 1085 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TGFB1I1O43294 461 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 ADAM20O43506 726 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CCNT1O60563 726 aaKnown RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 RARGP13631 454 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 ENGP17813 658 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 SCP2P22307 547 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TTKP33981 857 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 THPOP40225 353 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 PBX3P40426 434 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CAPZA2P47755 286 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 RAD23AP54725 363 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CDH8P55286 799 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TIRAPP58753 221 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TAS2R50P59544 299 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 EFNB1P98172 346 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 UBXN1Q04323 297 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TMEM115Q12893 351 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 SMC1AQ14683 1233 aaKnown RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 Q4G0T1 1027 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 GARNL3Q5VVW2 1013 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TTI2Q6NXR4 508 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CDC73Q6P1J9 531 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CHST9Q7L1S5 443 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 BCDIN3DQ7Z5W3 292 aaKnown RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 DNAAF5Q86Y56 855 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 NUP93Q8N1F7 819 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 SCML4Q8N228 414 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 METTL25Q8N6Q8 603 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 GOT1L1Q8NHS2 421 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 GSDMBQ8TAX9 411 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CNOT9Q92600 299 aaKnown RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 FAM149B1Q96BN6 582 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 INTS12Q96CB8 462 aaKnown RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 PERPQ96FX8 193 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 HIC2Q96JB3 615 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 HGH1Q9BTY7 390 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 DPCDQ9BVM2 203 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 NDST4Q9H3R1 872 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 EPHX3Q9H6B9 360 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TTC12Q9H892 705 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-210ENST00000547654 TRIM36Q9NQ86 728 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 THAP1Q9NVV9 213 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 SLCO3A1Q9UIG8 710 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CDH22Q9UJ99 828 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 PCDHB2Q9Y5E7 798 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 PRDM2Q13029 1718 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 GAPVD1Q14C86 1478 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 FANCD2Q9BXW9 1451 aa4.48□□□□□ -1.69
SCAF11-210ENST00000547654 CCDC187A0A096LP49 1063 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 C17orf113A0A1B0GUU1 675 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 EIF3CLB5ME19 914 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 PER2O15055 1255 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 SPRY2O43597 315 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 HBP1O60381 514 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 ENTPD3O75355 529 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 URODP06132 367 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 NPSP0C0P6 89 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 TBXAS1P24557 533 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 FPR3P25089 353 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CCKARP32238 428 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 ICAM3P32942 547 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 PIK3CAP42336 1068 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CDK18Q07002 472 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 WASHC5Q12768 1159 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 TFCP2Q12800 502 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 MTAPQ13126 283 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 DAZAP2Q15038 168 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 DPCR1Q3MIW9 517 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CERKLQ49MI3 558 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 AASDHQ4L235 1098 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 SLC9B1Q4ZJI4 515 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 MIDNQ504T8 468 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 RAB41Q5JT25 222 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 ERMARDQ5T6L9 678 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 FAM90A2PQ658T7 463 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 KRT80Q6KB66 452 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 KIAA1161Q6NSJ0 714 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 WDR93Q6P2C0 686 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 TRIM72Q6ZMU5 477 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms