RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 UHRF1Q96T88 793 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 FTHL17Q9BXU8 183 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 SARDHQ9UL12 918 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 SNX10Q9Y5X0 201 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 UTRNP46939 3433 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 USP2O75604 605 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 FYNP06241 537 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 CKMT2P17540 419 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 SLC7A1P30825 629 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 C1QTNF8P60827 252 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 FASTKQ14296 549 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 PPP1R3AQ16821 1122 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 AGKQ53H12 422 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 TRIM67Q6ZTA4 783 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 RPS27LQ71UM5 84 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 OTOP3Q7RTS5 596 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 RIN3Q8TB24 985 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 MAML3Q96JK9 1138 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 DUSP16Q9BY84 665 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 MRPL46Q9H2W6 279 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 NOL11Q9H8H0 719 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 LRRC4Q9HBW1 653 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 WDR6Q9NNW5 1121 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 CCDC167Q9P0B6 97 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 IPO11Q9UI26 975 aaKnown RBP12.81□□□□□ -0.36
CACNB3-204ENST00000547230 TRHDEQ9UKU6 1024 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 RAD54BQ9Y620 910 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
CACNB3-204ENST00000547230 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 NRP1O14786 923 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TIPRLO75663 272 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 JCHAINP01591 159 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 STMN1P16949 149 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 GALNT2Q10471 571 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 STX5Q13190 355 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 SQLEQ14534 574 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 LAYNQ6UX15 382 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 PIWIL4Q7Z3Z4 852 aaKnown RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 USP33Q8TEY7 942 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 HEXDCQ8WVB3 486 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 DUS3LQ96G46 650 aaKnown RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TEKT5Q96M29 485 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 ANKRD60Q9BZ19 345 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 GOLGA2P5Q9HBQ8 144 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 SPAG4Q9NPE6 437 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 NCKIPSDQ9NZQ3 722 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 CD300AQ9UGN4 299 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 GINS2Q9Y248 185 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 FAM155AB1AL88 458 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 PSMD12O00232 456 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 PIRO00625 290 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 SOCS2O14508 198 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 NCAM2O15394 837 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 ZSCAN9O15535 394 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 RECQL4O94761 1208 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 IMPDH2P12268 514 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 AKAP5P24588 427 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 ARNTP27540 789 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 STT3AP46977 705 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TAS2R39P59534 338 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TMEM62Q0P6H9 643 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TRAP1Q12931 704 aaKnown RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 KCTD2Q14681 263 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 POU6F1Q14863 301 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 NAPEPLDQ6IQ20 393 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TRIM74Q86UV6 250 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 TRIM73Q86UV7 250 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 CNTN4Q8IWV2 1026 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 RBM12BQ8IXT5 1001 aaKnown RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 B3GALNT2Q8NCR0 500 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 NTAN1Q96AB6 310 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 RANBP9Q96S59 729 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 CYP4F12Q9HCS2 524 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 MRPL40Q9NQ50 206 aaKnown RBP12.8□□□□□ -0.36
CACNB3-204ENST00000547230 SQORQ9Y6N5 450 aa12.8□□□□□ -0.36
CACNB3-204ENST00000547230 MRASO14807 208 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 UBDO15205 165 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 MTSS1O43312 755 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 NPR3P17342 541 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 KCNA5P22460 613 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 DNAJB1P25685 340 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 SLC1A2P43004 574 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 GJA9P57773 515 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 TUBA4AP68366 448 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 SCAPQ12770 1279 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 MAPRE2Q15555 327 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 NHSL2Q5HYW2 709 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 PITRM1Q5JRX3 1037 aa12.79□□□□□ -0.36
CACNB3-204ENST00000547230 ESRP1Q6NXG1 681 aaKnown RBP12.79□□□□□ -0.36
CACNB3-204ENST00000547230 SLC27A1Q6PCB7 646 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms