RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SNAP91O60641 907 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 RAMP2O60895 175 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 RNASEH2AO75792 299 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SEMA4FO95754 770 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MT-CO1P00395 513 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 CFIP05156 583 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SYPP08247 313 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SERPINF2P08697 491 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 FAM228BP0C875 321 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SRCP12931 536 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 GOT1P17174 413 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MAOBP27338 520 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ACSL1P33121 698 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 EIF4A3P38919 411 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MAP2K3P46734 347 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 PSMD8P48556 350 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF135P52742 658 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ATXN3P54252 364 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 YBEYP58557 167 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 TPI1P60174 286 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 IRX4P78413 519 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 OGDHQ02218 1023 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 GFPT1Q06210 699 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 PIGHQ14442 188 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 POLD3Q15054 466 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 STPG1Q5TH74 334 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DCAF12L1Q5VU92 463 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DAB2IPQ5VWQ8 1189 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 TCEAL6Q6IPX3 200 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ERMP1Q7Z2K6 904 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DGLUCYQ7Z3D6 616 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 SYT9Q86SS6 491 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 NLRP14Q86W24 1093 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF354CQ86Y25 554 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 PSTKQ8IV42 348 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 PYROXD2Q8N2H3 581 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 HDDC3Q8N4P3 179 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 RTL3Q8N8U3 475 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DNASE2BQ8WZ79 361 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ARHGEF2Q92974 986 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 TCEAL3Q969E4 200 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 CRELD1Q96HD1 420 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DNAJC7Q99615 494 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 EDEM2Q9BV94 578 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MAGEB5Q9BZ81 275 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 CEP44Q9C0F1 390 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 THAP2Q9H0W7 228 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 MIR1-1HGQ9H1L0 117 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 NEUROG2Q9H2A3 272 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 DHX35Q9H5Z1 703 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ZFYVE1Q9HBF4 777 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 TMEM9BQ9NQ34 198 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ARHGAP20Q9P2F6 1191 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF212Q9UDV6 495 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 PCSK1NQ9UHG2 260 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 IP6K2Q9UHH9 426 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 FZD4Q9ULV1 537 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 TPX2Q9ULW0 747 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 AP4E1Q9UPM8 1137 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 CFAP54Q96N23 3096 aa7.52□□□□□ -1.21
CPSF7-224ENST00000544990 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.21
CPSF7-224ENST00000544990 NUMA1Q14980 2115 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ADAMTS9Q9P2N4 1935 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 A0A1B0GTW7 788 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 LNP1A1A4G5 178 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 FAM47DPA6NHR8 397 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 WASH4PA8MWX3 477 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 K7ERQ8 282 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 MYO1FO00160 1098 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 EEF2KO00418 725 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 BCAT2O15382 392 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SLC7A4O43246 635 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SMAD6O43541 496 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 KDELR3O43731 214 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 AKR1B10O60218 316 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 LRCH4O75427 683 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ZMPSTE24O75844 475 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 FSBPO95073 299 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 PRNPP04156 253 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 CYP1A2P05177 515 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 H2AFZP0C0S5 128 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 VAV1P15498 845 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ENGP17813 658 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 GLDCP23378 1020 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 MIPP30301 263 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 GSTT1P30711 240 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 CHRNA3P32297 505 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 PCK1P35558 622 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SERPINH1P50454 418 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 DNA2P51530 1060 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 GALCP54803 685 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SEMA3BQ13214 749 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SLC18A3Q16572 532 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 HADHQ16836 314 aaKnown RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 BOLA3Q53S33 107 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ARTNQ5T4W7 220 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-224ENST00000544990 C22orf39Q6P5X5 142 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 SARM1Q6SZW1 724 aa7.51□□□□□ -1.21
CPSF7-224ENST00000544990 NXPE4Q6UWF7 544 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms