RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 GMIPQ9P107 970 aa18.25■□□□□ 0.51
TNFAIP1-202ENST00000544907 ZNF212Q9UDV6 495 aa18.25■□□□□ 0.51
TNFAIP1-202ENST00000544907 MAGED2Q9UNF1 606 aaPredicted RBP18.25■□□□□ 0.51
TNFAIP1-202ENST00000544907 FAM95CA0A1B0GW59 222 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 LIN7AO14910 233 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 MOCS2O96007 188 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 SLC26A3P40879 764 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 PTDSS1P48651 473 aaKnown RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 SERPINH1P50454 418 aaKnown RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 DNAJB13P59910 316 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 ACTR3P61158 418 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 KDSRQ06136 332 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 BTKQ06187 659 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 SLC34A1Q06495 639 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 IL10RBQ08334 325 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 GPR17Q13304 367 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 UBAP2LQ14157 1087 aaKnown RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 SLC14A2Q15849 920 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 DDR2Q16832 855 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 CFAP157Q5JU67 520 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 NAPRTQ6XQN6 538 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 ULK2Q8IYT8 1036 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 KIRREL3Q8IZU9 778 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 CENPLQ8N0S6 344 aaPredicted RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 CCDC126Q96EE4 140 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 MRPL57Q9BQC6 102 aaKnown RBP18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 COG4Q9H9E3 785 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 FBXO5Q9UKT4 447 aa18.24■□□□□ 0.51
TNFAIP1-202ENST00000544907 H7C4K7 107 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 HDAC3O15379 428 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 SLC7A4O43246 635 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 TBC1D4O60343 1298 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 NPHS1O60500 1241 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 PMPCBO75439 489 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 EPOP01588 193 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 SBK3P0C264 359 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 ZDHHC11BP0C7U3 371 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 HOXB8P17481 243 aaPredicted RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 GLDCP23378 1020 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 VHLP40337 213 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 LEPRP48357 1165 aaKnown RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 RPL14P50914 215 aaKnown RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 CLCN5P51795 746 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 MSLNQ13421 630 aaPredicted RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 ZRSR2Q15696 482 aaKnown RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 CNGA3Q16281 694 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 C5orf22Q49AR2 442 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 TSTD2Q5T7W7 516 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 LRRC8EQ6NSJ5 796 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 NEPROQ6NW34 567 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 ZNF781Q8N8C0 355 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 TDRD5Q8NAT2 981 aaKnown RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 TSPAN17Q96FV3 270 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 GPR78Q96P69 363 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 CCDC28BQ9BUN5 200 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 MRPL46Q9H2W6 279 aaKnown RBP18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 RIMKLBQ9ULI2 386 aa18.23■□□□□ 0.51
TNFAIP1-202ENST00000544907 HOXA2O43364 376 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 CCNT2O60583 730 aaKnown RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 SELPP16109 830 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 ACADSP16219 412 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 SLC1A2P43004 574 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 AAGABQ6PD74 315 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 PIWIL4Q7Z3Z4 852 aaKnown RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 FSTL5Q8N475 847 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 FBXO32Q969P5 355 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 HMCESQ96FZ2 354 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 ZNF570Q96NI8 536 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 ZNF599Q96NL3 588 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 TMEM175Q9BSA9 504 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 SP110Q9HB58 689 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 RUVBL2Q9Y230 463 aaKnown RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 NUP205Q92621 2012 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 LOC285095A0A1B0GVY8 99 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 MROH6A6NGR9 719 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 VGLL3A8MV65 326 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 FKBP6O75344 327 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 IBSPP21815 317 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 PBX3P40426 434 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 GRIA4P48058 902 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 ATN1P54259 1190 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 USP46P62068 366 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 NAA25Q14CX7 972 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 RCN1Q15293 331 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 SH2D4BQ5SQS7 431 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 LRRC8DQ7L1W4 858 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 UBE2Q1Q7Z7E8 422 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 SETD3Q86TU7 594 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 ABI1Q8IZP0 508 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 CPSF7Q8N684 471 aaKnown RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 ACTRT2Q8TDY3 377 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 WDR60Q8WVS4 1066 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 NAF1Q96HR8 494 aaKnown RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 FAM161BQ96MY7 647 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 MARCH2Q9P0N8 246 aa18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 CORO1CQ9ULV4 474 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 PRG3Q9Y2Y8 225 aaPredicted RBP18.22■□□□□ 0.51
TNFAIP1-202ENST00000544907 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms