RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 UGP2Q16851 508 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 INO80DQ53TQ3 878 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 RNF219Q5W0B1 726 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 CDHR3Q6ZTQ4 885 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 MAB21L3Q8N8X9 362 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 ZNF75CPQ92670 426 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 ATP2A3Q93084 1043 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 AGAP2Q99490 1192 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 ELAC2Q9BQ52 826 aaKnown RBP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 PITPNM3Q9BZ71 974 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 RIMKLBQ9ULI2 386 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 STARD13Q9Y3M8 1113 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 OR51B4Q9Y5P0 310 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 CXorf51AA0A1B0GTR3 108 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 MROH6A6NGR9 719 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 H0Y626 953 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 KLF11O14901 512 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TBL1XO60907 577 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 FGF1P05230 155 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CKMP06732 381 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ATXN1LP0C7T5 689 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 DNAJB1P25685 340 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ARNTP27540 789 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CDK18Q07002 472 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 NSUN2Q08J23 767 aaKnown RBP eCLIP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CYTH1Q15438 398 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 DBN1Q16643 649 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SIRPB2Q5JXA9 342 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TSTD2Q5T7W7 516 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 RNF43Q68DV7 783 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ESRP1Q6NXG1 681 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 GABPB2Q8TAK5 448 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 FAM111AQ96PZ2 611 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 PLCD4Q9BRC7 762 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CINPQ9BW66 212 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SLC46A2Q9BY10 475 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SLC17A6Q9P2U8 582 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ARHGAP26Q9UNA1 814 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SH3BP1Q9Y3L3 701 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 MIA3Q5JRA6 1907 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 A0A1W2PRU2 124 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TPP1O14773 563 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 BIRC5O15392 142 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 EDF1O60869 148 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 GLRA3O75311 464 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 VAPBO95292 243 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 IL1BP01584 269 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 HNRNPA1P09651 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 PTPN2P17706 415 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TYK2P29597 1187 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SERPINB4P48594 390 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SERPINB8P50452 374 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ILF2Q12905 390 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CNGA3Q16281 694 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 MPPE1Q53F39 396 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 RALGPS1Q5JS13 557 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 FYB2Q5VWT5 728 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 FSTL4Q6MZW2 842 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TRIM42Q8IWZ5 723 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 LMNTD2Q8IXW0 634 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 CALML6Q8TD86 181 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 ALG14Q96F25 216 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 TRIB3Q96RU7 358 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 FAM167BQ9BTA0 163 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 SLC13A1Q9BZW2 595 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 MUC3BQ9H195 1237 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 RHOJQ9H4E5 214 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 MANSC1Q9H8J5 431 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 PCMTD2Q9NV79 361 aa12.88□□□□□ -0.35
PAAF1-214ENST00000544552 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
PAAF1-214ENST00000544552 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-214ENST00000544552 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-214ENST00000544552 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CBX4O00257 560 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CCL16O15467 120 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 INSIG1O15503 277 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 SLC7A4O43246 635 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 NDST3O95803 873 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CD160O95971 181 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 MPOP05164 745 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 GSTA1P08263 222 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms