RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 DNAJC3Q13217 504 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 CDH18Q13634 790 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 SMAD1Q15797 465 aaKnown RBP20.06■□□□□ 0.8
COPS7A-218ENST00000543939 ZSCAN26Q16670 478 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 SIRPB2Q5JXA9 342 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 MROH9Q5TGP6 573 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 DDI1Q8WTU0 396 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 APOPT1Q96IL0 206 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 PRKD2Q9BZL6 878 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 TREX1Q9NSU2 369 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 HCFC2Q9Y5Z7 792 aa20.06■□□□□ 0.8
COPS7A-218ENST00000543939 TM9SF1O15321 606 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 SERPINF2P08697 491 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 DRD4P21917 467 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 NEK3P51956 506 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 NTHL1P78549 312 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 IL9RQ01113 521 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 HSP90AA5PQ58FG0 334 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 GRTP1Q5TC63 336 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 PDPK2PQ6A1A2 396 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 TAX1BP1Q86VP1 789 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 MFN1Q8IWA4 741 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 TCP10LQ8TDR4 215 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 ZNF473Q8WTR7 871 aaKnown RBP20.05■□□□□ 0.8
COPS7A-218ENST00000543939 USP13Q92995 863 aaPredicted RBP20.05■□□□□ 0.8
COPS7A-218ENST00000543939 ZNF707Q96C28 371 aaPredicted RBP20.05■□□□□ 0.8
COPS7A-218ENST00000543939 AGAP2Q99490 1192 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 DPP7Q9UHL4 492 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 ANKRD36A6QL64 1941 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 CCDC78A2IDD5 438 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 CDK18Q07002 472 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 ZNF697Q5TEC3 545 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 ESRP1Q6NXG1 681 aaKnown RBP20.05■□□□□ 0.8
COPS7A-218ENST00000543939 ADGRD2Q7Z7M1 963 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 DCAF4L2Q8NA75 395 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 RIN3Q8TB24 985 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 BHMTQ93088 406 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 MAGEB18Q96M61 343 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 NSMCE3Q96MG7 304 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 NOD2Q9HC29 1040 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 MKS1Q9NXB0 559 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 TXNDC16Q9P2K2 825 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 VPS28Q9UK41 221 aa20.05■□□□□ 0.8
COPS7A-218ENST00000543939 CHD7Q9P2D1 2997 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 CCDC195A0A1B0GUA6 201 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 HEATR9A2RTY3 570 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 INSIG1O15503 277 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 ITGA2BP08514 1039 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 HLA-DPA1P20036 260 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 CES1P23141 567 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 ARNTP27540 789 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 PBX2P40425 430 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 ARCN1P48444 511 aaKnown RBP20.04■□□□□ 0.8
COPS7A-218ENST00000543939 INO80DQ53TQ3 878 aaPredicted RBP20.04■□□□□ 0.8
COPS7A-218ENST00000543939 FYB2Q5VWT5 728 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 LINGO4Q6UY18 593 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 TPGS1Q6ZTW0 290 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 GRASPQ7Z6J2 395 aaPredicted RBP20.04■□□□□ 0.8
COPS7A-218ENST00000543939 RBM23Q86U06 439 aaKnown RBP20.04■□□□□ 0.8
COPS7A-218ENST00000543939 IFT43Q96FT9 208 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 TRIB3Q96RU7 358 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 FAM107BQ9H098 131 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 IARS2Q9NSE4 1012 aaKnown RBP20.04■□□□□ 0.8
COPS7A-218ENST00000543939 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 SLC2A6Q9UGQ3 507 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 VPS51Q9UID3 782 aa20.04■□□□□ 0.8
COPS7A-218ENST00000543939 MYOFQ9NZM1 2061 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 TMCC1O94876 653 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 FGF1P05230 155 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 SCNN1BP51168 640 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 SEPT6Q14141 434 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 KIAA0930Q6ICG6 404 aaPredicted RBP20.03■□□□□ 0.8
COPS7A-218ENST00000543939 FOXR1Q6PIV2 292 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 LVRNQ6Q4G3 990 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 STRA8Q7Z7C7 330 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 LRRC34Q8IZ02 419 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 FIBINQ8TAL6 211 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 NUDCD1Q96RS6 583 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 RBBP8Q99708 897 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 PAIP2Q9BPZ3 127 aaKnown RBP20.03■□□□□ 0.8
COPS7A-218ENST00000543939 MCMBPQ9BTE3 642 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 SLC17A7Q9P2U7 560 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 GRID1Q9ULK0 1009 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 CLEC4EQ9ULY5 219 aa20.03■□□□□ 0.8
COPS7A-218ENST00000543939 PAPSS2O95340 614 aaPredicted RBP20.02■□□□□ 0.8
COPS7A-218ENST00000543939 FOXN2P32314 431 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 CSE1LP55060 971 aaKnown RBP20.02■□□□□ 0.8
COPS7A-218ENST00000543939 CNGA3Q16281 694 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 QPCTQ16769 361 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 TSTD2Q5T7W7 516 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 HHATQ5VTY9 493 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 CNTN4Q8IWV2 1026 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 APCDD1Q8J025 514 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 EXOC2Q96KP1 924 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 CERS4Q9HA82 394 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 SCUBE2Q9NQ36 999 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 NSMCE4AQ9NXX6 385 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 PLK2Q9NYY3 685 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 LHX3Q9UBR4 397 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 ZMYM5Q9UJ78 669 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms