RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 A0A1W2PP55 124 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 PGRMC1O00264 195 aaKnown RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 PLK4O00444 970 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 KCNN4O15554 427 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 LIASO43766 372 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 ZNF217O75362 1048 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 PIGNO95427 931 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 PRLRP16471 622 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 CASQ1P31415 396 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 MAPK8P45983 427 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 DSC2Q02487 901 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 TCF15Q12870 199 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 SNX1Q13596 522 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 GRM3Q14832 879 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 MAP7D1Q3KQU3 841 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 USP39Q53GS9 565 aaKnown RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 ALG1LQ6GMV1 187 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 GDPD4Q6W3E5 623 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 AADATQ8N5Z0 425 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 FAM160A2Q8N612 972 aaPredicted RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 FRMD1Q8N878 549 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 ZBTB44Q8NCP5 570 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 ARRDC3Q96B67 414 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 PPP1R16AQ96I34 528 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 TEKT5Q96M29 485 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 NSMCE3Q96MG7 304 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 KLHL32Q96NJ5 620 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 TUBGCP5Q96RT8 1024 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 NAP1L3Q99457 506 aaPredicted RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 OMDQ99983 421 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 SEMA3CQ99985 751 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 FERMT1Q9BQL6 677 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 OSBPL1AQ9BXW6 950 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 NOD2Q9HC29 1040 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 FBXL12Q9NXK8 326 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 USP36Q9P275 1121 aaKnown RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
SP140-213ENST00000543928 SERGEFQ9UGK8 458 aa13.79□□□□□ -0.2
SP140-213ENST00000543928 EML5Q05BV3 1969 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 RNASEH2AO75792 299 aaKnown RBP13.78□□□□□ -0.2
SP140-213ENST00000543928 ITGB7P26010 798 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 SERPINA4P29622 427 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 DRD3P35462 400 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 P2RY2P41231 377 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 NIPAL4Q0D2K0 466 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 CNTN1Q12860 1018 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
SP140-213ENST00000543928 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
SP140-213ENST00000543928 BYSLQ13895 437 aaKnown RBP13.78□□□□□ -0.2
SP140-213ENST00000543928 OASLQ15646 514 aaKnown RBP13.78□□□□□ -0.2
SP140-213ENST00000543928 CCNG2Q16589 344 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 ZNF805Q5CZA5 627 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 RALGPS1Q5JS13 557 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 FAM124AQ86V42 546 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 HDDC3Q8N4P3 179 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 ARRDC2Q8TBH0 407 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
SP140-213ENST00000543928 SPACA7Q96KW9 195 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 CAPZA3Q96KX2 299 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 VAT1Q99536 393 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 TMEM121Q9BTD3 319 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 ATP13A3Q9H7F0 1226 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 DYRK4Q9NR20 520 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 NCKAP1Q9Y2A7 1128 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 MUC6Q6W4X9 2439 aa13.78□□□□□ -0.2
SP140-213ENST00000543928 IGHV1OR15-9A0A0B4J2B8 117 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 CFAP69A5D8W1 941 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 ZNF189O75820 626 aaPredicted RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 STK10O94804 968 aaKnown RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 IGLV3-19P01714 112 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 CES1P23141 567 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 OXTRP30559 389 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 BCL2L1Q07817 233 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 ERN2Q76MJ5 926 aaKnown RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 PID1Q7Z2X4 250 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 KBTBD6Q86V97 674 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 ZSCAN30Q86W11 494 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 PRELID2Q8N945 189 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 FAM71DQ8N9W8 422 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 GAB3Q8WWW8 586 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 ZNF641Q96N77 438 aaPredicted RBP13.77□□□□□ -0.21
SP140-213ENST00000543928 AP1M1Q9BXS5 423 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 HDAC8Q9BY41 377 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 KCNH6Q9H252 994 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms