RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 NUP85Q9BW27 656 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SSBP4Q9BWG4 385 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF341Q9BYN7 854 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 POLR1EQ9GZS1 481 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NAPBQ9H115 298 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ATP13A3Q9H7F0 1226 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ERVMER34-1Q9H9K5 563 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A7Q9HAW7 530 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A10Q9HAW8 530 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UGT1A8Q9HAW9 530 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 GP6Q9HCN6 339 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 WDR6Q9NNW5 1121 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TIGARQ9NQ88 270 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PRDM5Q9NQX1 630 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 HOMER2Q9NSB8 354 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 TBC1D22BQ9NU19 505 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 B3GNT2Q9NY97 397 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PKD2L2Q9NZM6 624 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 FBXO40Q9UH90 709 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 KCNH3Q9ULD8 1083 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SMG5Q9UPR3 1016 aaKnown RBP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 CHKBQ9Y259 395 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PRELID3BQ9Y3B1 194 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF451Q9Y4E5 1061 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 PCDHA5Q9Y5H7 936 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 MAU2Q9Y6X3 613 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 KIF1AQ12756 1690 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 UBE4BO95155 1302 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 NRCAMQ92823 1304 aa4.4□□□□□ -1.71
SNHG1-219ENST00000542112 MYH13Q9UKX3 1938 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 BCL9LQ86UU0 1499 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ABCA3Q99758 1704 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TRAV20A0A0B4J274 112 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 A0A0G2JPF8 293 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 A0A1W2PQ72 361 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PQLC2LA1A4F0 135 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 HEATR9A2RTY3 570 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PRR23AA6NEV1 266 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CENPXA8MT69 81 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 B4E1Z4 1266 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 HNRNPCL3B7ZW38 293 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 F8W036 122 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 H3BSA7 217 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RBAK-RBAKDNI3L0D1 243 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 I3L4J1 428 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 L7N2F9 121 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PSMD11O00231 422 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PGRMC1O00264 195 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PODXLO00592 558 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 KIAA0355O15063 1070 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF185O15231 689 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PPM1DO15297 605 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZBTB43O43298 467 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RAD51CO43502 376 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DFNA5O60443 496 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 EDF1O60869 148 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 USP2O75604 605 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CLPXO76031 633 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 KLHL18O94889 574 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CAMTA2O94983 1202 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 APOL3O95236 402 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RASGRP1O95267 797 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DEXIO95424 95 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 H6PDO95479 791 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 EOMESO95936 686 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PTTG1O95997 202 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CFBP00751 764 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 GSNP06396 782 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 S100A9P06702 114 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 FAM87AP0C7U9 286 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SRGAP2BP0DMP2 458 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 HNRNPCL4P0DMR1 293 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CSF2RAP15509 400 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TGM1P22735 817 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RPA1P27694 616 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PGM1P36871 562 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TXNL4AP83876 142 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 MYBPC1Q00872 1141 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ROR1Q01973 937 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CYP27A1Q02318 531 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DLG1Q12959 904 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 IFIT5Q13325 482 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TOP3AQ13472 1001 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 THOC5Q13769 683 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ERV3-1Q14264 604 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DMC1Q14565 340 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 FASTKD3Q14CZ7 662 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TAF5Q15542 800 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TRADDQ15628 312 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DLG2Q15700 870 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CYP2A13Q16696 494 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 UGP2Q16851 508 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TYSND1Q2T9J0 566 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF568Q3ZCX4 644 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 GTDC1Q4AE62 458 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 FBXO48Q5FWF7 155 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TCTE1Q5JU00 501 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 FAM209BQ5JX69 171 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RTP2Q5QGT7 225 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms