RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PSME3P61289 254 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 CYP51A1Q16850 503 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 LINGO4Q6UY18 593 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 TMEM110Q86TL2 294 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 DENND1CQ8IV53 801 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 FBXO27Q8NI29 283 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 PAAF1Q9BRP4 392 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 TBC1D13Q9NVG8 400 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 GID8Q9NWU2 228 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 NUMA1Q14980 2115 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 RGSL1A5PLK6 1076 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 TPSB2P20231 275 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 MAP4P27816 1152 aaKnown RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 CCNHP51946 323 aaPredicted RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 SLC7A2P52569 658 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 SLC5A3P53794 718 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 NRG1Q02297 640 aaPredicted RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 PTPRCAPQ14761 206 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 TPSAB1Q15661 275 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 NEDD8Q15843 81 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 ARHGAP36Q6ZRI8 547 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 FAM162AQ96A26 154 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 MPP4Q96JB8 637 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 OXCT2Q9BYC2 517 aaPredicted RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 ENTPD7Q9NQZ7 604 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 SNX5Q9Y5X3 404 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 ARL5CA6NH57 179 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 SERPIND1P05546 499 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 SLC2A4P14672 509 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 PSMA4P25789 261 aaKnown RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 DPYSL2Q16555 572 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 LSM12Q3MHD2 195 aaKnown RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 ATP6AP1LQ52LC2 224 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 CNSTQ6PJW8 725 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 C11orf74Q86VG3 221 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 SLC44A2Q8IWA5 706 aaPredicted RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 CATSPER1Q8NEC5 780 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 AP2A1O95782 977 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 RPL17P18621 184 aaKnown RBP16.25■□□□□ 0.19
VARS2-212ENST00000542001 FCGRTP55899 365 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 NET1Q7Z628 596 aaPredicted RBP16.25■□□□□ 0.19
VARS2-212ENST00000542001 DHFR2Q86XF0 187 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 SLC39A3Q9BRY0 314 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 SYT17Q9BSW7 474 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 RAP2CQ9Y3L5 183 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
VARS2-212ENST00000542001 PRR23AA6NEV1 266 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 HIST1H2AGP0C0S8 130 aaPredicted RBP16.25■□□□□ 0.19
VARS2-212ENST00000542001 HGFP14210 728 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 HIST1H2ADP20671 130 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 PBLDP30039 288 aaPredicted RBP16.25■□□□□ 0.19
VARS2-212ENST00000542001 CDCA2Q69YH5 1023 aaPredicted RBP16.25■□□□□ 0.19
VARS2-212ENST00000542001 ARHGAP18Q8N392 663 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 PARP8Q8N3A8 854 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 FIG4Q92562 907 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 TMEM169Q96HH4 297 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 HIST1H2AHQ96KK5 128 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 HIST1H2AJQ99878 128 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 H2AFJQ9BTM1 129 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 RHOJQ9H4E5 214 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 ZFP14Q9HCL3 533 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 GMIPQ9P107 970 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 KANSL1LA0AUZ9 987 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 CRABP2P29373 138 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 TAF10Q12962 218 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 PDK3Q15120 406 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 MFN1Q8IWA4 741 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 RBBP8Q99708 897 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 PCDHAC1Q9H158 963 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 CDH22Q9UJ99 828 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
VARS2-212ENST00000542001 AGRPO00253 132 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 BIRC5O15392 142 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 ATP5F1P24539 256 aaPredicted RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 TMEM86AQ8N2M4 240 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 JADE3Q92613 823 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 GFM2Q969S9 779 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 C7orf26Q96N11 449 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 CIB1Q99828 191 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 SMIM35A0A1B0GVV1 85 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 LTA4HP09960 611 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 GSTT1P30711 240 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PPP3CCP48454 512 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PLD1Q13393 1074 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 ANKS6Q68DC2 871 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 CGB2Q6NT52 195 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 NAPRTQ6XQN6 538 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 DSELQ8IZU8 1212 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 ACMSDQ8TDX5 336 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 NRBF2Q96F24 287 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 VAT1Q99536 393 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 CLPBQ9H078 707 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 TLR8Q9NR97 1041 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 KIF17Q9P2E2 1029 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 CIDEBQ9UHD4 219 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 TIPRLO75663 272 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms