RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 WDR55Q9H6Y2 383 aaPredicted RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 CLCA2Q9UQC9 943 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 MYH4Q9Y623 1939 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 A0A0U1RQS6 177 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 A0A1W2PQ67 120 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 ACSL4O60488 711 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 GALTP07902 379 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 NUDT17P0C025 328 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 GNA12Q03113 381 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 CCDC85BQ15834 202 aaPredicted RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 BRMS1LQ5PSV4 323 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 GRTP1Q5TC63 336 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 CAMK1DQ8IU85 385 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 CMTM8Q8IZV2 173 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 SLC35B2Q8TB61 432 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 KLK6Q92876 244 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 MOCOSQ96EN8 888 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 ZNF333Q96JL9 665 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 DNAJC1Q96KC8 554 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 EFHD1Q9BUP0 239 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PPCSQ9HAB8 311 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 CACYBPQ9HB71 228 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PNPOQ9NVS9 261 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PCDHA11Q9Y5I1 949 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PMM2O15305 246 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 AKAP10O43572 662 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PEX11AO75192 247 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 MTA2O94776 668 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 HSPA8P11142 646 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 LAG3P18627 525 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PSEN1P49768 467 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 COPAP53621 1224 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PKNOX1P55347 436 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 ALFQ53S48 1182 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 METTL6Q8TCB7 284 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 GFM2Q969S9 779 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 CDK5RAP1Q96SZ6 601 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 WRAP53Q9BUR4 548 aaKnown RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 ACE2Q9BYF1 805 aaPredicted RBP9.64□□□□□ -0.87
TTC39C-203ENST00000540918 TCF7L2Q9NQB0 619 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 ZDHHC18Q9NUE0 388 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 NDE1Q9NXR1 346 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 PCDHGB4Q9UN71 923 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 Q9Y3F1 56 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 KCTD3Q9Y597 815 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 MYH7BA7E2Y1 1941 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 SPTBN2O15020 2390 aa9.64□□□□□ -0.87
TTC39C-203ENST00000540918 A0A0D9SEW6 157 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 RFPL2O75678 378 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ATP5HO75947 161 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 PCNAP12004 261 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 MC4RP32245 332 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 PPM1AP35813 382 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ZNF252P-AS1Q0IIN9 211 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 GRM3Q14832 879 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 CYTH1Q15438 398 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 TTLL9Q3SXZ7 439 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 UBXN11Q5T124 520 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ALYREFQ86V81 257 aaKnown RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 DEFB107AQ8IZN7 70 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 MREGQ8N565 214 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 PCDH20Q8N6Y1 951 aaKnown RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 PTGR2Q8N8N7 351 aaPredicted RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 C11orf49Q9H6J7 331 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 RUBCNLQ9H714 662 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ABCB8Q9NUT2 735 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 YIPF1Q9Y548 306 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 GVINP1Q7Z2Y8 2422 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 LAMA4Q16363 1823 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 NEMP2A6NFY4 417 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 NOL3O60936 208 aaKnown RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 MTX2O75431 263 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ABCB1P08183 1280 aaPredicted RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 MSH3P20585 1137 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 INCA1Q0VD86 236 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ABRQ12979 859 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 UBAP2LQ14157 1087 aaKnown RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 IGDCC3Q8IVU1 814 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 PQLC3Q8N755 202 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 OR13C4Q8NGS5 318 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 CKAP2Q8WWK9 683 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 MAGED4Q96JG8 741 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 GJD2Q9UKL4 321 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 RAI2Q9Y5P3 530 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 DDX60Q8IY21 1712 aaKnown RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 MTMR11A4FU01 709 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 TK2O00142 265 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 TM9SF1O15321 606 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 ATP5BP06576 529 aaKnown RBP9.63□□□□□ -0.87
TTC39C-203ENST00000540918 USP46P62068 366 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 CES5AQ6NT32 575 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 CYP2R1Q6VVX0 501 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 NXNL1Q96CM4 212 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
TTC39C-203ENST00000540918 OSBPL7Q9BZF2 842 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms