RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 EVPLLA8MZ36 301 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 F8W810 466 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 TRDMT1O14717 391 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 SLC9A3R1O14745 358 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 ACOX3O15254 700 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MAPK13O15264 365 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 NCK2O43639 380 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 TSPAN6O43657 245 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RNASEH1O60930 286 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 FKBP6O75344 327 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ENTPD5O75356 428 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 CFBP00751 764 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 FGAP02671 866 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SHBGP04278 402 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RARBP10826 455 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RARGP13631 454 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ZNF20P17024 532 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ZNF3P17036 446 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ATF7P17544 494 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 RPS6KB1P23443 525 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MARCKSP29966 332 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 SLC5A2P31639 672 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 CASRP41180 1078 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SYKP43405 635 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 CLK3P49761 638 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 AP2S1P53680 142 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 C21orf59P57076 290 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SNX16P57768 344 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 STX1BP61266 288 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 POLR2GP62487 172 aaKnown RBP eCLIP4.88□□□□□ -1.63
MDM2-226ENST00000540352 ADAM8P78325 824 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SCRN3Q0VDG4 424 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RALGDSQ12967 914 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 CDC16Q13042 620 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 KRT32Q14532 448 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SEMA3AQ14563 771 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SF3B4Q15427 424 aaKnown RBP eCLIP4.88□□□□□ -1.631e-7■■■■□ 26.1
MDM2-226ENST00000540352 UAP1Q16222 522 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 KCTD21Q4G0X4 260 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ANKRD20A4Q4UJ75 823 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 TIGD2Q4W5G0 525 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 C6orf163Q5TEZ5 329 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 AGAP7PQ5VUJ5 663 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MBNL2Q5VZF2 373 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 LMBRD2Q68DH5 695 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 AAGABQ6PD74 315 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 BLOC1S2Q6QNY1 142 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 FAM180AQ6UWF9 173 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 UNC5DQ6UXZ4 953 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MIGA2Q7L4E1 593 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 TAS1R1Q7RTX1 841 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ZNF677Q86XU0 584 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SPATA2LQ8IUW3 424 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 ELMOD2Q8IZ81 293 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 CBARPQ8N350 705 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 LINC00301Q8NCQ3 95 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 C1orf162Q8NEQ5 155 aaPredicted RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 GRPEL2Q8TAA5 225 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ENKURQ8TC29 256 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SLC2A14Q8TDB8 520 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 TSPEARQ8WU66 669 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 FATE1Q969F0 183 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 TBC1D20Q96BZ9 403 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 PLEKHA8Q96JA3 519 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 NLRP4Q96MN2 994 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SERPINB12Q96P63 405 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ORAI2Q96SN7 254 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 DDX50Q9BQ39 737 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 TUBA1CQ9BQE3 449 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SELENOSQ9BQE4 189 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 C17orf80Q9BSJ5 609 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 ADI1Q9BV57 179 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 APOL5Q9BWW9 433 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SYTL2Q9HCH5 934 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 POLD4Q9HCU8 107 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RIC8AQ9NPQ8 531 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MAN1C1Q9NR34 630 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SLC38A7Q9NVC3 462 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 NDE1Q9NXR1 346 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 FNIP2Q9P278 1114 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RSL24D1Q9UHA3 163 aaKnown RBP4.88□□□□□ -1.63
MDM2-226ENST00000540352 SLC7A8Q9UHI5 535 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 POLG2Q9UHN1 485 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 CDH7Q9ULB5 785 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 HPSEQ9Y251 543 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 GPR45Q9Y5Y3 372 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 PREX2Q70Z35 1606 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 UNC13BO14795 1591 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 SAMD9LQ8IVG5 1584 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 MYH6P13533 1939 aa4.88□□□□□ -1.63
MDM2-226ENST00000540352 RFX7Q2KHR2 1363 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 MAP3K19Q56UN5 1328 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 KDM3AQ9Y4C1 1321 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 TRAV6A0A075B6T7 132 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 A0A1W2PRQ8 180 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 LRRC72A6NJI9 287 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 H7C0C1 242 aa4.87□□□□□ -1.63
MDM2-226ENST00000540352 K7EPI3 171 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms