RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 USP24Q9UPU5 2620 aa12.93□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PLXNB3Q9ULL4 1909 aa12.93□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 COL5A1P20908 1838 aaPredicted RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CABIN1Q9Y6J0 2220 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TMEM191CA6NGB0 347 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 WASH4PA8MWX3 477 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 J3KR12 359 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TAF4O00268 1085 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 INSIG1O15503 277 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TSPAN6O43657 245 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PRPSAP2O60256 369 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PIGNO95427 931 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ITIH2P19823 946 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 XPAP23025 273 aaPredicted RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 DGKAP23743 735 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PRKCIP41743 596 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ACADVLP49748 655 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 FANCCQ00597 558 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 NR1I3Q14994 352 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CYTH1Q15438 398 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SMAD1Q15797 465 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HS1BP3Q53T59 392 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PPP6R3Q5H9R7 873 aaPredicted RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ERMARDQ5T6L9 678 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 KDM7AQ6ZMT4 941 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ABI3BPQ7Z7G0 1075 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 UMODL1-AS1Q8N2C9 162 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CASKIN2Q8WXE0 1202 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 RAB7BQ96AH8 199 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 BMFQ96LC9 184 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 WRAP53Q9BUR4 548 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SLC39A8Q9C0K1 460 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 KLHL11Q9NVR0 708 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 LHX3Q9UBR4 397 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 IPO11Q9UI26 975 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CHD5Q8TDI0 1954 aa12.92□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TRABD2BA6NFA1 517 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ARHGAP42A6NI28 874 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 DFFAO00273 331 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TRIM38O00635 465 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 FPGTO14772 594 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SPINT1O43278 529 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SIGLEC6O43699 453 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 MMP20O60882 483 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 GZMAP12544 262 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 JUPP14923 745 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CKMT2P17540 419 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 MIPP30301 263 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HTR7P34969 479 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PAPOLAP51003 745 aaKnown RBP12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 DAB2P98082 770 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 INO80DQ53TQ3 878 aaPredicted RBP12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 KYAT3Q6YP21 454 aaKnown RBP12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 RFX8Q6ZV50 586 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 VPS36Q86VN1 386 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PROSER1Q86XN7 944 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CXorf40AQ8TE69 158 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 VOPP1Q96AW1 172 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ARHGEF26Q96DR7 871 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 C1QTNF2Q9BXJ5 285 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 LRRC19Q9H756 370 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HS3ST3A1Q9Y663 406 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 GOLGA6L19H0YKK7 550 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PIAS2O75928 621 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CAPNS1P04632 268 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ERCC2P18074 760 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HNF1BP35680 557 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 RABIFP47224 123 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 NDST2P52849 883 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 UBASH3AP57075 661 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PDE1CQ14123 709 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 FZD2Q14332 565 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CFAP58Q5T655 872 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HES3Q5TGS1 186 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 CYP4V2Q6ZWL3 525 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 DCP2Q8IU60 420 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 PAF1Q8N7H5 531 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 FAM174AQ8TBP5 190 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TSC1Q92574 1164 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 HSPH1Q92598 858 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 KLF6Q99612 283 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 EDEM3Q9BZQ6 932 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 ZWILCHQ9H900 591 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 DONSONQ9NYP3 566 aa12.9□□□□□ -0.34
TSPAN9-IT1-201ENST00000539784 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
TSPAN9-IT1-201ENST00000539784 SPEGQ15772 3267 aa12.89□□□□□ -0.35
TSPAN9-IT1-201ENST00000539784 AREL1O15033 823 aa12.89□□□□□ -0.35
TSPAN9-IT1-201ENST00000539784 PRAMEF11O60813 436 aa12.89□□□□□ -0.35
TSPAN9-IT1-201ENST00000539784 LRCH4O75427 683 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms