RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 HS3ST3A1Q9Y663 406 aa22.53■■□□□ 1.2
SCARB1-206ENST00000539320 RAD51BO15315 384 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 SPINT1O43278 529 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 PAK4O96013 591 aaPredicted RBP22.52■■□□□ 1.2
SCARB1-206ENST00000539320 RAD51Q06609 339 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 SERINC3Q13530 473 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 Q6ZSR6 202 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 DCP2Q8IU60 420 aaKnown RBP22.52■■□□□ 1.2
SCARB1-206ENST00000539320 DENND6BQ8NEG7 585 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 IFT43Q96FT9 208 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 FUCA2Q9BTY2 467 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 TTYH3Q9C0H2 523 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 DONSONQ9NYP3 566 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 AIPL1Q9NZN9 384 aa22.52■■□□□ 1.2
SCARB1-206ENST00000539320 DMXL2Q8TDJ6 3036 aa22.52■■□□□ 1.19
SCARB1-206ENST00000539320 TDRD6O60522 2096 aaKnown RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 IGLON5A6NGN9 336 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 EIF3CLB5ME19 914 aaKnown RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 PIAS2O75928 621 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 CKMT2P17540 419 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 DGKAP23743 735 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 HNF1BP35680 557 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 SGCGQ13326 291 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 ILKQ13418 452 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 CAMK2BQ13554 666 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 IQCB1Q15051 598 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 PROX2Q3B8N5 592 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 HS1BP3Q53T59 392 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 GDPD4Q6W3E5 623 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 DNAAF5Q86Y56 855 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 NETO2Q8NC67 525 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 BMFQ96LC9 184 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 NAP1L5Q96NT1 182 aaPredicted RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 EIF3CQ99613 913 aaKnown RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 SNRNP25Q9BV90 132 aaKnown RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 C1QTNF2Q9BXJ5 285 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 DHX35Q9H5Z1 703 aaKnown RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 LHX3Q9UBR4 397 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 UBA2Q9UBT2 640 aaPredicted RBP22.51■■□□□ 1.19
SCARB1-206ENST00000539320 DKK4Q9UBT3 224 aa22.51■■□□□ 1.19
SCARB1-206ENST00000539320 CACNA1GO43497 2377 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 POM121BA6NF01 834 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 EEF2KO00418 725 aaKnown RBP22.5■■□□□ 1.19
SCARB1-206ENST00000539320 TRIM38O00635 465 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 AREL1O15033 823 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 SIGLEC6O43699 453 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 GZMAP12544 262 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 RABIFP47224 123 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 CLDN6P56747 220 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 KLHL30Q0D2K2 578 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 HES3Q5TGS1 186 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 SLC25A45Q8N413 288 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 PDCD7Q8N8D1 485 aaKnown RBP22.5■■□□□ 1.19
SCARB1-206ENST00000539320 OR4C6Q8NH72 309 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 FNIP1Q8TF40 1166 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 ASB12Q8WXK4 309 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 ZNF653Q96CK0 615 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 LENG8Q96PV6 779 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-206ENST00000539320 PEBP4Q96S96 227 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 KLF6Q99612 283 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-206ENST00000539320 EDEM3Q9BZQ6 932 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 LRRC19Q9H756 370 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 UCKL1Q9NWZ5 548 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 CNOT8Q9UFF9 292 aaKnown RBP22.5■■□□□ 1.19
SCARB1-206ENST00000539320 MFHAS1Q9Y4C4 1052 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 SCINQ9Y6U3 715 aa22.5■■□□□ 1.19
SCARB1-206ENST00000539320 TRABD2BA6NFA1 517 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 TMEM191CA6NGB0 347 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 DDX3XO00571 662 aaKnown RBP eCLIP22.49■■□□□ 1.193e-8■■■■□ 25.9
SCARB1-206ENST00000539320 FPGTO14772 594 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 FFAR2O15552 330 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 SERPINC1P01008 464 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 FTLP02792 175 aaPredicted RBP22.49■■□□□ 1.19
SCARB1-206ENST00000539320 ZNF211Q13398 564 aaPredicted RBP22.49■■□□□ 1.19
SCARB1-206ENST00000539320 CA9Q16790 459 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 LRRC73Q5JTD7 316 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 PARGQ86W56 976 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 EXOC2Q96KP1 924 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 KCTD15Q96SI1 283 aaPredicted RBP22.49■■□□□ 1.19
SCARB1-206ENST00000539320 NCAPGQ9BPX3 1015 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 TRIM7Q9C029 511 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 PDFQ9HBH1 243 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 DNAJC28Q9NX36 388 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 DKK3Q9UBP4 350 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 PCSK1NQ9UHG2 260 aa22.49■■□□□ 1.19
SCARB1-206ENST00000539320 URB1O60287 2271 aaKnown RBP22.48■■□□□ 1.19
SCARB1-206ENST00000539320 PRPSAP2O60256 369 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 RNF8O76064 485 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 ALPPL2P10696 532 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 JUPP14923 745 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 ACP1P24666 158 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 NDST2P52849 883 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 HNRNPKP61978 463 aaKnown RBP eCLIP22.48■■□□□ 1.191e-6■■■■□ 24.3
SCARB1-206ENST00000539320 DAB2P98082 770 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 FZD2Q14332 565 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 ZNF542PQ5EBM4 170 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 ERMARDQ5T6L9 678 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 TTC7BQ86TV6 843 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 ARFGAP1Q8N6T3 406 aa22.48■■□□□ 1.19
SCARB1-206ENST00000539320 TRIM11Q96F44 468 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms