RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CCDC89Q8N998 374 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ETNPPLQ8TBG4 499 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ROBO4Q8WZ75 1007 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 HIST1H2AAQ96QV6 131 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ABHD1Q96SE0 405 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF347Q96SE7 839 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FAM110AQ9BQ89 295 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SRSF8Q9BRL6 282 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FBRSL1Q9HCM7 1045 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TBCCD1Q9NVR7 557 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DLGAP2Q9P1A6 1054 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 KIAA1456Q9P272 454 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PKP3Q9Y446 797 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM17Q9Y577 477 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PCDHGB5Q9Y5G0 923 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPR98Q8WXG9 6306 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 COL11A2P13942 1736 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 UMODL1Q5DID0 1318 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 EMSYQ7Z589 1322 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1W2PR77 199 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 GRID2IPA4D2P6 1211 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 NKX6-3A6NJ46 265 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SUV39H1O43463 412 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PTMAP06454 111 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CLTBP09497 229 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DANCRP0C864 163 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RNF224P0DH78 156 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TCF4P15884 667 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 EEF1B2P24534 225 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF41P51814 821 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PNLIPRP2P54317 469 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 INHBEP58166 350 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 EIF4A1P60842 406 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 LMAN2Q12907 356 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MAMLD1Q13495 774 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 BFSP2Q13515 415 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 BECN1Q14457 450 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CNGA3Q16281 694 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CTU2Q2VPK5 515 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 P3H1Q32P28 736 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PLEKHO1Q53GL0 409 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RAB41Q5JT25 222 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DCST1Q5T197 706 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PRR27Q6MZM9 219 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FBXO42Q6P3S6 717 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MOB3CQ70IA8 216 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CACNA2D4Q7Z3S7 1137 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 OR8H2Q8N162 312 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 D2HGDHQ8N465 521 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CPEB3Q8NE35 698 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 C16orf52Q8NHV5 167 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 WFIKKN2Q8TEU8 576 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SNX19Q92543 992 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ZKSCAN4Q969J2 545 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SARAFQ96BY9 339 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 APOPT1Q96IL0 206 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PPP1R13BQ96KQ4 1090 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 HARBI1Q96MB7 349 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ADOQ96SZ5 270 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 BAG1Q99933 345 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MXD3Q9BW11 206 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ALOXE3Q9BYJ1 711 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SPRY4Q9C004 299 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MMP27Q9H306 513 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CCDC134Q9H6E4 229 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 AKIP1Q9NQ31 210 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 IL17RBQ9NRM6 502 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 COMMD8Q9NX08 183 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 GRHL1Q9NZI5 618 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CTNNAL1Q9UBT7 734 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PADI1Q9ULC6 663 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ADAM18Q9Y3Q7 739 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 IQSEC2Q5JU85 1478 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TCRBV7S3A2A0A539 114 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SDR42E2A6NKP2 422 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CAPN14A8MX76 684 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RNF103O00237 685 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CHL1O00533 1208 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARPC1BO15143 372 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RGS10O43665 173 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MTA2O94776 668 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DDHD2O94830 711 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DNTTP04053 509 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 LINGO3P0C6S8 592 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM225BP0DP42 221 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MAOAP21397 527 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MCCP23508 829 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 HIBADHP31937 336 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ME1P48163 572 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SLC12A3P55017 1021 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SLC37A1P57057 533 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARF3P61204 181 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARF1P84077 181 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 GRIK3Q13003 919 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SLC14A1Q13336 389 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TAF12Q16514 161 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TXNRD1Q16881 649 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SLC9B1Q4ZJI4 515 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ODF2Q5BJF6 829 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CRIP3Q6Q6R5 217 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms