RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 G3V2L1 256 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 MATN3O15232 486 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 DLX3O60479 287 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 HNRNPCL1O60812 293 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 PAMP19021 973 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 TFEBP19484 476 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 DNAJB2P25686 324 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 YWHAQP27348 245 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 SLC12A1Q13621 1099 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 PTPRRQ15256 657 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 TRIP10Q15642 601 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 LSM12Q3MHD2 195 aaKnown RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 CLEC6AQ6EIG7 209 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 LRRC8EQ6NSJ5 796 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 FBXL22Q6P050 247 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 ACAD11Q709F0 780 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 TMCO2Q7Z6W1 182 aaPredicted RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 DCBLD1Q8N8Z6 715 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 OR7D4Q8NG98 312 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 CD99L2Q8TCZ2 262 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 SCLYQ96I15 445 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 CDRT15Q96T59 188 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 NPAS2Q99743 824 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 RHOJQ9H4E5 214 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 BPIFA1Q9NP55 256 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 RRN3Q9NYV6 651 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.8□□□□□ -1
UBE3B-208ENST00000538070 PCDHB5Q9Y5E4 795 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 ARL5AQ9Y689 179 aa8.8□□□□□ -1
UBE3B-208ENST00000538070 ENO4A6NNW6 628 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CAPN14A8MX76 684 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 KCNU1A8MYU2 1149 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 PQBP1O60828 265 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 RAMP2O60895 175 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 MPOP05164 745 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SLC35E2BP0CK96 405 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CKBP12277 381 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 COX4I1P13073 169 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 GCKP35557 465 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 ABL2P42684 1182 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 ARSDP51689 593 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 ACLYP53396 1101 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 RAB10P61026 200 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 AP2B1P63010 937 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 DNAL1Q4LDG9 190 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 GPR158Q5T848 1215 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 FAM171BQ6P995 826 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 LIMS2Q7Z4I7 341 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 RCN3Q96D15 328 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CMTM5Q96DZ9 223 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SERPINB11Q96P15 392 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 FAM96AQ9H5X1 160 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 GKN1Q9NS71 199 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 UTP6Q9NYH9 597 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 GIMAP2Q9UG22 337 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 DSEQ9UL01 958 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 A0A0D9SEW6 157 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 MAGEB16A2A368 324 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 TBKBP1A7MCY6 615 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CBX4O00257 560 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 KPNA6O60684 536 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 TM7SF2O76062 418 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 LMNAP02545 664 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 ANPEPP15144 967 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CCNCP24863 283 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CASP2P42575 452 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 RPL14P50914 215 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 RAB27AP51159 221 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 C1QTNF8P60827 252 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SCAPQ12770 1279 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SREBF2Q12772 1141 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 DLG1Q12959 904 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 KLF10Q13118 480 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 FSCBQ5H9T9 825 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 KCTD11Q693B1 232 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 PM20D1Q6GTS8 502 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CAPRIN2Q6IMN6 1127 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 TLDC1Q6P9B6 456 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CD300LGQ6UXG3 332 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 LINGO4Q6UY18 593 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 MFSD6LQ8IWD5 586 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SH3TC2Q8TF17 1288 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 ESAMQ96AP7 390 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 MYEOVQ96EZ4 313 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SUSD3Q96L08 255 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 MRGPRX2Q96LB1 330 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 VAT1Q99536 393 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 TCAF1Q9Y4C2 921 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SKIP12755 728 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 GNAZP19086 355 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SERPINH1P50454 418 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 MLLT6P55198 1093 aaPredicted RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 RPS24P62847 133 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 SCIMPQ6UWF3 145 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 RTL3Q8N8U3 475 aaKnown RBP8.79□□□□□ -1
UBE3B-208ENST00000538070 OR13C4Q8NGS5 318 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 SLC45A3Q96JT2 553 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CCDC167Q9P0B6 97 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 ANGPTL2Q9UKU9 493 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 CDYLQ9Y232 598 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms