RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 OR13J1Q8NGT2 312 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 GPR150Q8NGU9 434 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 PSKH2Q96QS6 385 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 VPS11Q9H270 941 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 TRPM5Q9NZQ8 1165 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 LHX3Q9UBR4 397 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 PLLPQ9Y342 182 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 PCDHB12Q9Y5F1 795 aa8.1□□□□□ -1.11
COL21A1-212ENST00000535941 ZFP37Q9Y6Q3 630 aaPredicted RBP8.1□□□□□ -1.11
COL21A1-212ENST00000535941 A0A1B0GVM2 712 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 SNNO75324 88 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 EN2P19622 333 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GABRB3P28472 473 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CORO1AP31146 461 aaKnown RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 ACVRL1P37023 503 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CCR2P41597 374 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 LIMK2P53671 638 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GNA12Q03113 381 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 SF3A3Q12874 501 aaKnown RBP eCLIP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CUL3Q13618 768 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 LBRQ14739 615 aaKnown RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CYTH1Q15438 398 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 LACTB2Q53H82 288 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GRTP1Q5TC63 336 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 MFSD6LQ8IWD5 586 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 SPATA22Q8NHS9 363 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 SEC16BQ96JE7 1060 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 ARHGAP26Q9UNA1 814 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 ZNF510Q9Y2H8 683 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 TARM1B6A8C7 271 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 FGF19O95750 216 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 MT-CYBP00156 380 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 PRLP01236 227 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 RB1P06400 928 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 NAT1P18440 290 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 MSH2P43246 934 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GALNTL6Q49A17 601 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CERCAMQ5T4B2 595 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GET4Q7L5D6 327 aaPredicted RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 LCA5Q86VQ0 697 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 SRRM1Q8IYB3 904 aaKnown RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CCNYQ8ND76 341 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GRIN3AQ8TCU5 1115 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 AUTS2Q8WXX7 1259 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 AGAP3Q96P47 875 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 GPR22Q99680 433 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 SIK2Q9H0K1 926 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 INTS9Q9NV88 658 aaKnown RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 STARD13Q9Y3M8 1113 aa8.09□□□□□ -1.11
COL21A1-212ENST00000535941 TCF20Q9UGU0 1960 aaKnown RBP8.09□□□□□ -1.11
COL21A1-212ENST00000535941 CKAP5Q14008 2032 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 F5H5T6 163 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 DFFAO00273 331 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 LDB2O43679 373 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 PENKP01210 267 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 POLBP06746 335 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SNRPAP09012 282 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 KRT4P19013 534 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CES1P23141 567 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 NMBRP28336 390 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 MAGEA10P43363 369 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ALDH1A3P47895 512 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 EPHB3P54753 998 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 TIAL1Q01085 375 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SPARCL1Q14515 664 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 POLD3Q15054 466 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 TAF11Q15544 211 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CDKN3Q16667 212 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 PABPC1LQ4VXU2 614 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 INO80DQ53TQ3 878 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 RABGAP1LQ5R372 815 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SYCP2LQ5T4T6 812 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 PDE12Q6L8Q7 609 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 RWDD4Q6NW29 188 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CIR1Q86X95 450 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 PHC3Q8NDX5 983 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ATP2A3Q93084 1043 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CFAP36Q96G28 342 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ZNF570Q96NI8 536 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CYP4F11Q9HBI6 524 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 MARK1Q9P0L2 795 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 GGT7Q9UJ14 662 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 A0A0D9SEW6 157 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 BIRC5O15392 142 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SNX3O60493 162 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 RAMP2O60895 175 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CLASP2O75122 1294 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 MAGEA8P43361 318 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SUOXP51687 545 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 POLE2P56282 527 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CCDC15Q0P6D6 951 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ILF2Q12905 390 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 BLMHQ13867 455 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CCDC149Q6ZUS6 474 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms