RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ADRB3	P13945	408 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	PLA2G2A	P14555	144 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	NME1	P15531	152 aa	Known RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	TFE3	P19532	575 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	ITGB7	P26010	798 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	OR1E1	P30953	314 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	L1CAM	P32004	1257 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	GGCX	P38435	758 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	SERPINH1	P50454	418 aa	Known RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	CLDN2	P57739	230 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	TPD52L1	Q16890	204 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	SEL1L3	Q68CR1	1132 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	SARM1	Q6SZW1	724 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	TMC6	Q7Z403	805 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZNF605	Q86T29	641 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	IRF2BP1	Q8IU81	584 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	PASD1	Q8IV76	773 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	FAM71A	Q8IYT1	594 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	PCDH20	Q8N6Y1	951 aa	Known RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	TPCN2	Q8NHX9	752 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	RAB7B	Q96AH8	199 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	ISG20	Q96AZ6	181 aa	Known RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	LGMN	Q99538	433 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	KLF6	Q99612	283 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	HEPH	Q9BQS7	1158 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	ABCG4	Q9H172	646 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	PIF1	Q9H611	641 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	SYNC	Q9H7C4	482 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	SIX2	Q9NPC8	291 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	FZD3	Q9NPG1	666 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	ASCL3	Q9NQ33	180 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	SALL4	Q9UJQ4	1053 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	FADS3	Q9Y5Q0	445 aa		11.76	□□□□□ -0.53
CTNND1-238	ENST00000534647	POM121B	A6NF01	834 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	CBFA2T2	O43439	604 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	TSPAN6	O43657	245 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	CS	O75390	466 aa	Known RBP	11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	ENDOD1	O94919	500 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	PAK4	O96013	591 aa	Predicted RBP	11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	MPO	P05164	745 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	TPM3	P06753	285 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	RABIF	P47224	123 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZNF75D	P51815	510 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	TMPRSS3	P57727	454 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	CXADR	P78310	365 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	GABRE	P78334	506 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	SKOR1	P84550	965 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	APBA1	Q02410	837 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	CFHR1	Q03591	330 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	DEUP1	Q05D60	604 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	FGL2	Q14314	439 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	ISX	Q2M1V0	245 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	CARD16	Q5EG05	197 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	BROX	Q5VW32	411 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	DPY19L2P1	Q6NXN4	242 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	LINGO4	Q6UY18	593 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	CAPN12	Q6ZSI9	719 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	SLC47A2	Q86VL8	602 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	PARG	Q86W56	976 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	TMEM35B	Q8NCS4	154 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	ENOX1	Q8TC92	643 aa	Known RBP	11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	C18orf8	Q96DM3	657 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	TBATA	Q96M53	351 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	SLC46A1	Q96NT5	459 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	MYOC	Q99972	504 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	TNKS2	Q9H2K2	1166 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	ACBD3	Q9H3P7	528 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	DNAJC28	Q9NX36	388 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	MPP6	Q9NZW5	540 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	DNAJC12	Q9UKB3	198 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	DOLK	Q9UPQ8	538 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	DOCK9	Q9BZ29	2069 aa		11.75	□□□□□ -0.53
CTNND1-238	ENST00000534647	EME2	A4GXA9	379 aa	Predicted RBP	11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647		H3BM21	787 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	CD160	O95971	181 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	ETFB	P38117	255 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	SULT1E1	P49888	294 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	PFN3	P60673	137 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	NRG1	Q02297	640 aa	Predicted RBP	11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	GNA12	Q03113	381 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	SGCG	Q13326	291 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	TFAP2D	Q7Z6R9	452 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	XYLT1	Q86Y38	959 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	DENND6B	Q8NEG7	585 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	OR7D4	Q8NG98	312 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	IFI44	Q8TCB0	444 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	GRIN3A	Q8TCU5	1115 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	MAPK15	Q8TD08	544 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	BTN2A2	Q8WVV5	523 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	COL26A1	Q96A83	441 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	TBCB	Q99426	244 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZYG11B	Q9C0D3	744 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	THSD1	Q9NS62	852 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	TMEM59L	Q9UK28	342 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	PCDHGA8	Q9Y5G5	932 aa		11.74	□□□□□ -0.53
CTNND1-238	ENST00000534647	TOR1B	O14657	336 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms