RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
ATM-222ENST00000533733 MT-CYBP00156 380 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 PPARGP37231 505 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 FLT3LGP49771 235 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 FAM189BP81408 668 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 RING1Q06587 406 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 MSLNQ13421 630 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 TRIP4Q15650 581 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 DLG2Q15700 870 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 PSMD5Q16401 504 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 PARP15Q460N3 678 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 NOMO2Q5JPE7 1267 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 MARC1Q5VT66 337 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 NEPROQ6NW34 567 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 ESRP1Q6NXG1 681 aaKnown RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 NAPRTQ6XQN6 538 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 ARHGAP36Q6ZRI8 547 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 SLC22A9Q8IVM8 553 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 SCN4BQ8IWT1 228 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 CENPLQ8N0S6 344 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 TMEM209Q96SK2 561 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 CDK5RAP1Q96SZ6 601 aaKnown RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 TRMOQ9BU70 441 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 SP110Q9HB58 689 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 SFMBT1Q9UHJ3 866 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 CDH22Q9UJ99 828 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 FBXO5Q9UKT4 447 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 ANKRD36A6QL64 1941 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 TADA2AO75478 443 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 PIGNO95427 931 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 TFEBP19484 476 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 YY1P25490 414 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 GABRB3P28472 473 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 SLC1A2P43004 574 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 MAPKAPK2P49137 400 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 MTTPP55157 894 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 WNT3AP56704 352 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 SESN3P58005 492 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 DSG1Q02413 1049 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 CACNB2Q08289 660 aaPredicted RBP12.08□□□□□ -0.47
ATM-222ENST00000533733 IL10RBQ08334 325 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 RFTN1Q14699 578 aaPredicted RBP12.08□□□□□ -0.47
ATM-222ENST00000533733 ARTNQ5T4W7 220 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 TSTD2Q5T7W7 516 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 ZNF470Q6ECI4 717 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 ZNF280DQ6N043 979 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 TMEM126BQ8IUX1 230 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 COLGALT2Q8IYK4 626 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 ZNF683Q8IZ20 524 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 FBXW8Q8N3Y1 598 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 FBXO27Q8NI29 283 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 HASPINQ8TF76 798 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 C2orf15Q8WU43 125 aaKnown RBP12.08□□□□□ -0.47
ATM-222ENST00000533733 ZNF599Q96NL3 588 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 OSBPL1AQ9BXW6 950 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 SEZ6LQ9BYH1 1024 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 ELAC1Q9H777 363 aaKnown RBP12.08□□□□□ -0.47
ATM-222ENST00000533733 S100A14Q9HCY8 104 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 MRPL40Q9NQ50 206 aaKnown RBP12.08□□□□□ -0.47
ATM-222ENST00000533733 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.47
ATM-222ENST00000533733 XPR1Q9UBH6 696 aa12.08□□□□□ -0.47
ATM-222ENST00000533733 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 A6NHS1 94 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 DRGXA6NNA5 263 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 TK2O00142 265 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 PHGDHO43175 533 aaKnown RBP12.08□□□□□ -0.48
ATM-222ENST00000533733 DCXO43602 365 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 PMPCBO75439 489 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 EPOP01588 193 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 SBK3P0C264 359 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 CPB1P15086 417 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 ITGAXP20702 1163 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 ARNTP27540 789 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 CTGFP29279 349 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 PBX3P40426 434 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 NAA20P61599 178 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 IRX1P78414 480 aaPredicted RBP12.08□□□□□ -0.48
ATM-222ENST00000533733 SLC25A3Q00325 362 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 USP4Q13107 963 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 CUL3Q13618 768 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 MAPRE2Q15555 327 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 CNGA3Q16281 694 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 ARL13AQ5H913 290 aaPredicted RBP12.08□□□□□ -0.48
ATM-222ENST00000533733 PIK3R6Q5UE93 754 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 TRIM68Q6AZZ1 485 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 ANO7Q6IWH7 933 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 SLC41A1Q8IVJ1 513 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 SPPL2BQ8TCT7 592 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 DTX3LQ8TDB6 740 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 KCTD4Q8WVF5 259 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 TADA1Q96BN2 335 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 FAM136AQ96C01 138 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 ELMO2Q96JJ3 720 aa12.08□□□□□ -0.48
ATM-222ENST00000533733 SPATA17Q96L03 361 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms