RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 GLRX5Q86SX6 157 aa30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 SPATS2Q86XZ4 545 aaKnown RBP30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 ARHGAP12Q8IWW6 846 aa30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 HSPH1Q92598 858 aa30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 ERVMER34-1Q9H9K5 563 aa30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 LHX3Q9UBR4 397 aa30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 H3BRJ5 948 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 TRIM16O95361 564 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 RARAP10276 462 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 HNRNPA2B1P22626 353 aaKnown RBP30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 AKT2P31751 481 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 ABL2P42684 1182 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 GRK6P43250 576 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 SHBQ15464 509 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 NPWQ8N729 165 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 CDC6Q99741 560 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 MYOCQ99972 504 aa30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 STAU2Q9NUL3 570 aaKnown RBP eCLIP30.71■■■□□ 2.51
SSSCA1-207ENST00000533115 MYO1FO00160 1098 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 YKT6O15498 198 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 TPM1P09493 284 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 FTH1P19P0C7X4 201 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 ARL4AP40617 200 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 ARRB1P49407 418 aaPredicted RBP30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 SLC18A3Q16572 532 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 OXR1Q8N573 874 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 TEKT4Q8WW24 435 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 KLHDC7BQ96G42 594 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 EXOC2Q96KP1 924 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 FZD3Q9NPG1 666 aa30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 ZNHIT6Q9NWK9 470 aaKnown RBP30.7■■■□□ 2.51
SSSCA1-207ENST00000533115 DFFAO00273 331 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 TSPAN6O43657 245 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 SPINK2P20155 84 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 SLC25A11Q02978 314 aaKnown RBP30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 MAPK8IP2Q13387 824 aaPredicted RBP30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 ASTE1Q2TB18 679 aaPredicted RBP30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 INAVAQ3KP66 663 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 TXNRD3NBQ6F5E7 133 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 POLNQ7Z5Q5 900 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 ZSCAN30Q86W11 494 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 LZTR1Q8N653 840 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 ZNF564Q8TBZ8 553 aaPredicted RBP30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 SCNM1Q9BWG6 230 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 SLC17A9Q9BYT1 436 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 CPEB1Q9BZB8 566 aaKnown RBP30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 TRPM6Q9BX84 2022 aa30.69■■■□□ 2.5
SSSCA1-207ENST00000533115 SSU72P8A0A1W2PR75 194 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 INSIG1O15503 277 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 RXRGP48443 463 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 TSR1Q2NL82 804 aaKnown RBP30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 GATAD2AQ86YP4 633 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 SAP25Q8TEE9 199 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 DEF6Q9H4E7 631 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 ABHD10Q9NUJ1 306 aa30.68■■■□□ 2.5
SSSCA1-207ENST00000533115 NEMP1O14524 444 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 HYAL3O43820 417 aaPredicted RBP30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 ITGAVP06756 1048 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 THEGLP0DJG4 465 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 FGL2Q14314 439 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 ARHGAP36Q6ZRI8 547 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 TTC7BQ86TV6 843 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 CSPG4P5Q96PW8 444 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 SP110Q9HB58 689 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 CTTNBP2NLQ9P2B4 639 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 DKK3Q9UBP4 350 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 GGT7Q9UJ14 662 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 APOBEC2Q9Y235 224 aaKnown RBP30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 ITM2BQ9Y287 266 aa30.67■■■□□ 2.5
SSSCA1-207ENST00000533115 SPINT1O43278 529 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 PALMO75781 387 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 PAK4O96013 591 aaPredicted RBP30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 H2AFZP0C0S5 128 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 AMPD1P23109 780 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 EPHA8P29322 1005 aaPredicted RBP30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 IL10RBQ08334 325 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 GRM3Q14832 879 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 GCNT7Q6ZNI0 430 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 H2AFVQ71UI9 128 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 CTNNBL1Q8WYA6 563 aaPredicted RBP30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 C1QTNF2Q9BXJ5 285 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 PACSIN1Q9BY11 444 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 PCDH18Q9HCL0 1135 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 ETNK2Q9NVF9 386 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 UVRAGQ9P2Y5 699 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 HS3ST3A1Q9Y663 406 aa30.66■■■□□ 2.5
SSSCA1-207ENST00000533115 IGLON5A6NGN9 336 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 AREL1O15033 823 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 MFAP3LO75121 409 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 SSR1P43307 286 aaKnown RBP30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 ADKP55263 362 aaKnown RBP30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 CLDN2P57739 230 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 SGCGQ13326 291 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 RFTN1Q14699 578 aaPredicted RBP30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 TMCO3Q6UWJ1 677 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 RAB44Q7Z6P3 723 aaPredicted RBP30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 ABI3BPQ7Z7G0 1075 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 SLCO6A1Q86UG4 719 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 TP53INP2Q8IXH6 220 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 CHCHD4Q8N4Q1 142 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms