RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 H0Y626 953 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 J3QW42 95 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SGK1O00141 431 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RASA4O43374 803 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 BNIP3LO60238 219 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 DNAJA2O60884 412 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CLEC3AO75596 197 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ALDH1A2O94788 518 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 APBB3O95704 486 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 GYPCP04921 128 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SERPING1P05155 500 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 THBS1P07996 1170 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TPM1P09493 284 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SKILP12757 684 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PDGFRAP16234 1089 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 DESP17661 470 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TACR2P21452 398 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 HLA-FP30511 346 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 NTSR1P30989 418 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 HOXC12P31275 282 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CASP14P31944 242 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CNR2P34972 360 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RFC1P35251 1148 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 WASP42768 502 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PXNP49023 591 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CXCR3P49682 368 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SGSHP51688 502 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 GSCP56915 257 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RPS24P62847 133 aaKnown RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 GPLD1P80108 840 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ATP11AP98196 1134 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 DMWDQ09019 674 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PTP4A2Q12974 167 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRKG2Q13237 762 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CDH18Q13634 790 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 EIF4HQ15056 248 aaKnown RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 E2F5Q15329 346 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CRY1Q16526 586 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CCDC14Q49A88 953 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TDRD12Q587J7 1177 aaKnown RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 BRMS1LQ5PSV4 323 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RABGAP1LQ5R372 815 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 OTUD1Q5VV17 481 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RAP1GAP2Q684P5 730 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TRNP1Q6NT89 227 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 DNAJC24Q6P3W2 148 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 MON1BQ7L1V2 547 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF571Q7Z3V5 609 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 VPS36Q86VN1 386 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 LONP2Q86WA8 852 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SLC41A1Q8IVJ1 513 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 MFN1Q8IWA4 741 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 MCOLN2Q8IZK6 566 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 LGI2Q8N0V4 545 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CARNMT1Q8N4J0 409 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 IL17RCQ8NAC3 791 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZBTB44Q8NCP5 570 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 C3orf20Q8ND61 904 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 JOSD2Q8TAC2 188 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 GPBAR1Q8TDU6 330 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 WFIKKN2Q8TEU8 576 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 UCMAQ8WVF2 138 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RXFP2Q8WXD0 754 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SYN2Q92777 582 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 MYEOVQ96EZ4 313 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PGAP3Q96FM1 320 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 VCPIP1Q96JH7 1222 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 MRGPRX3Q96LB0 322 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PRICKLE1Q96MT3 831 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 RPRD1AQ96P16 312 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SYT11Q9BT88 431 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 CIPCQ9C0C6 399 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 WDR12Q9GZL7 423 aaKnown RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TKTL2Q9H0I9 626 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SEMA4AQ9H3S1 761 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ABCB8Q9NUT2 735 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 ELOVL2Q9NXB9 296 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 TAS2R14Q9NYV8 317 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 GGA2Q9UJY4 613 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 SOX13Q9UN79 622 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 PCDHGB3Q9Y5G1 929 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 HS3ST4Q9Y661 456 aa5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 BZW2Q9Y6E2 419 aaKnown RBP5.94□□□□□ -1.46
HMGB1P42-201ENST00000532126 MYH10P35580 1976 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 F5P12259 2224 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 TCRBV21S2A2A0A5A6 115 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FAM187AA6NFU0 413 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 C2CD4BA6NLJ0 364 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 SIGLEC16A6NMB1 481 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 FAM227AF5H4B4 570 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 DDX3XO00571 662 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 RGS13O14921 159 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 NPC1O15118 1278 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 AXIN1O15169 862 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 MAN1A2O60476 641 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 LILRB5O75023 590 aa5.93□□□□□ -1.46
HMGB1P42-201ENST00000532126 ADAM23O75077 832 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms