RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	DQX1	Q8TE96	717 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	NANOS1	Q8WY41	292 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	RTP4	Q96DX8	246 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	IPO9	Q96P70	1041 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	EFHD1	Q9BUP0	239 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	ASPSCR1	Q9BZE9	553 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	MLXIPL	Q9NP71	852 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	CNGB3	Q9NQW8	809 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	DYRK4	Q9NR20	520 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	MBNL1	Q9NR56	388 aa	Known RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	ITM2B	Q9Y287	266 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372	TLR6	Q9Y2C9	796 aa		11.93	□□□□□ -0.5
PSMD13-209	ENST00000529372		B4E171	279 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	NUDT21	O43809	227 aa	Known RBP	11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	EXOC3	O60645	756 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	CD1C	P29017	333 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	TSPAN7	P41732	249 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	ABL2	P42684	1182 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	LIMK2	P53671	638 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	OR1D5	P58170	312 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	SGCG	Q13326	291 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	NNT	Q13423	1086 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	NR1D2	Q14995	579 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	GOLGA7B	Q2TAP0	167 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	C14orf28	Q4W4Y0	310 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	SP5	Q6BEB4	398 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	LINGO4	Q6UY18	593 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	DPY19L3	Q6ZPD9	716 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	ZNF438	Q7Z4V0	828 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	ZSCAN30	Q86W11	494 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	CHSY1	Q86X52	802 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	HID1	Q8IV36	788 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	TAS1R2	Q8TE23	839 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	CLEC4C	Q8WTT0	213 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	PSMB7	Q99436	277 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	TRIM55	Q9BYV6	548 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	DMAC2	Q9NW81	257 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	SLC39A1	Q9NY26	324 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	CCDC39	Q9UFE4	941 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	IL36A	Q9UHA7	158 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	ITGB1BP2	Q9UKP3	347 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	TSPAN16	Q9UKR8	245 aa		11.92	□□□□□ -0.5
PSMD13-209	ENST00000529372	TCAF2	A6NFQ2	919 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	SPTLC2	O15270	562 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	SNAP91	O60641	907 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	THRA	P10827	490 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	RRM1	P23921	792 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	L1CAM	P32004	1257 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	STAT5A	P42229	794 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	PIK3CA	P42336	1068 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	LEPR	P48357	1165 aa	Known RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	BLK	P51451	505 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	COPB1	P53618	953 aa	Known RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	DPYD	Q12882	1025 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	EDRF1	Q3B7T1	1238 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	AMZ1	Q400G9	498 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	C17orf82	Q86X59	251 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	GKN2	Q86XP6	184 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	APLF	Q8IW19	511 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	SIX6OS1	Q8N1H7	587 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	AGBL5	Q8NDL9	886 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	C19orf60	Q96EN9	201 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	INTS2	Q9H0H0	1204 aa	Known RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	TFIP11	Q9UBB9	837 aa	Known RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	FBXO2	Q9UK22	296 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	OAS3	Q9Y6K5	1087 aa	Known RBP	11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	JMJD1C	Q15652	2540 aa		11.91	□□□□□ -0.5
PSMD13-209	ENST00000529372	TSPAN6	O43657	245 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	RASGRP1	O95267	797 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	DLGAP3	O95886	979 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	BMP15	O95972	392 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	LTF	P02788	710 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	LCP1	P13796	627 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	CSF2RB	P32927	897 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	CENPC	Q03188	943 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	BST2	Q10589	180 aa	Known RBP	11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	NR6A1	Q15406	480 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	CLPP	Q16740	277 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	ZRANB3	Q5FWF4	1079 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	FAM26F	Q5R3K3	315 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	DCAF12	Q5T6F0	453 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	PAPD7	Q5XG87	772 aa	Known RBP	11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	TAC4	Q86UU9	113 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	VPS36	Q86VN1	386 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	UBA3	Q8TBC4	463 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	IRGQ	Q8WZA9	623 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	PDXP	Q96GD0	296 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	PPP1R16A	Q96I34	528 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	CLIC6	Q96NY7	704 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	SERPINB11	Q96P15	392 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	RANBP9	Q96S59	729 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	SLC29A3	Q9BZD2	475 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	TNKS2	Q9H2K2	1166 aa		11.9	□□□□□ -0.5
PSMD13-209	ENST00000529372	CISH	Q9NSE2	258 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms