RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CHRNB2P17787 502 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 ITGB6P18564 788 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 IRAK1P51617 712 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 GSCP56915 257 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 KRT83P78385 493 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NRG1Q02297 640 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NCAPHQ15003 741 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NR0B2Q15466 257 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 ALFQ53S48 1182 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 TRNP1Q6NT89 227 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 GUSBP11Q6P575 273 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 HORMAD1Q86X24 394 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 SH2D3CQ8N5H7 860 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 ZSCAN1Q8NBB4 408 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF548Q8NEK5 533 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NEK11Q8NG66 645 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 KLK6Q92876 244 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NAT6Q93015 286 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 CFAP57Q96MR6 1250 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 C2orf49Q9BVC5 232 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 NLRC4Q9NPP4 1024 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 PPARGC1AQ9UBK2 798 aaKnown RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 SALL4Q9UJQ4 1053 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 HS3ST2Q9Y278 367 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-203ENST00000527916 PCDHGA7Q9Y5G6 932 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 TRPM6Q9BX84 2022 aa10.73□□□□□ -0.69
CPSF1-203ENST00000527916 UTP20O75691 2785 aaKnown RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 RP1L1Q8IWN7 2480 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 EME2A4GXA9 379 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 A6NNZ2 444 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 GOLGA8SH3BPF8 625 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 TMX2-CTNND1H3BSU7 103 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 EFSO43281 561 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 CNTN5O94779 1100 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 RHOCP08134 193 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 CLCN6P51797 869 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 UBXN1Q04323 297 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 TLE1Q04724 770 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 SLC20A2Q08357 652 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 PTP4A2Q12974 167 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 EIF3IQ13347 325 aaKnown RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 SERINC3Q13530 473 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 SPIDRQ14159 915 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 SYCP1Q15431 976 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 DLG2Q15700 870 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF284Q2VY69 593 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 C2CD6Q53TS8 623 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF542PQ5EBM4 170 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 Q6ZSR6 202 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 STRADAQ7RTN6 431 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 APTXQ7Z2E3 356 aaKnown RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 PTAR1Q7Z6K3 402 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 ABI3BPQ7Z7G0 1075 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 JAMLQ86YT9 394 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 DCAF4L2Q8NA75 395 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 SLC20A1Q8WUM9 679 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 CENPIQ92674 756 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 CCDC114Q96M63 670 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 PSMB7Q99436 277 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 IL12RB2Q99665 862 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 BPIFA3Q9BQP9 254 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 NAT10Q9H0A0 1025 aaKnown RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 MUC3BQ9H195 1237 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 FZD3Q9NPG1 666 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 DYRK4Q9NR20 520 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 SEPT10Q9P0V9 454 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 ZNF212Q9UDV6 495 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 IPO11Q9UI26 975 aaKnown RBP10.72□□□□□ -0.69
CPSF1-203ENST00000527916 VPS28Q9UK41 221 aa10.72□□□□□ -0.69
CPSF1-203ENST00000527916 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 ILVBLA1L0T0 632 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 C2CD4BA6NLJ0 364 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 TPP1O14773 563 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PLD2O14939 933 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 AQP9O43315 295 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PCDH8O95206 1070 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 CSF2P04141 144 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 CCDC172P0C7W6 258 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 SRCP12931 536 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 NME1P15531 152 aaKnown RBP10.71□□□□□ -0.69
CPSF1-203ENST00000527916 OR1E1P30953 314 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 SDC4P31431 198 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 SLC5A2P31639 672 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 ADRA1BP35368 520 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 GGCXP38435 758 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PTPN9P43378 593 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 CLDN2P57739 230 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 TAS2R38P59533 333 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 CCDC14Q49A88 953 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PIP5KL1Q5T9C9 394 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PARGQ86W56 976 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 SLC22A18ASQ8N1D0 253 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 FBXO39Q8N4B4 442 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 TMIEQ8NEW7 156 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms