RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CEP70Q8NHQ1 597 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC2A14Q8TDB8 520 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 IPCEF1Q8WWN9 437 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MRPS27Q92552 414 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 WASF1Q92558 559 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TFAP2CQ92754 450 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 BORCS5Q969J3 196 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CIDECQ96AQ7 238 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 HDAC11Q96DB2 347 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC47A1Q96FL8 570 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RBM18Q96H35 190 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF184Q99676 751 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GAL3ST1Q99999 423 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TRIM15Q9C019 465 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CLPBQ9H078 707 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 DDX47Q9H0S4 455 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RBM38Q9H0Z9 239 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 KCNN2Q9H2S1 579 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM206Q9H813 350 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ACAD9Q9H845 621 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MARCH7Q9H992 704 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 NCOA5Q9HCD5 579 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SYTL2Q9HCH5 934 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CD209Q9NNX6 404 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 NLRC4Q9NPP4 1024 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 DIABLOQ9NR28 239 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SH3GLB2Q9NR46 395 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TXLNGQ9NUQ3 528 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZDHHC7Q9NXF8 308 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PAQR5Q9NXK6 330 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GGA3Q9NZ52 723 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 STMN3Q9NZ72 180 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SIRPGQ9P1W8 387 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC17A6Q9P2U8 582 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ARPP21Q9UBL0 812 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 UBA2Q9UBT2 640 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF212Q9UDV6 495 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ATP6V1HQ9UI12 483 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GNPTGQ9UJJ9 305 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 LAMP5Q9UJQ1 280 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC8A2Q9UPR5 921 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 STXBP5LQ9Y2K9 1186 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 AP3M1Q9Y2T2 418 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PRKAB1Q9Y478 270 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SNX8Q9Y5X2 465 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SAR1BQ9Y6B6 198 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM131LA2VDJ0 1609 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 NESP48681 1621 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 EIF2AK4Q9P2K8 1649 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 INO80Q9ULG1 1556 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MAST1Q9Y2H9 1570 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 URB2Q14146 1524 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 LRRC7Q96NW7 1537 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MAGI2Q86UL8 1455 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MAGI1Q96QZ7 1491 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ABCC5O15440 1437 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 PTCH1Q13635 1447 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 A0A1W2PP64 1363 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 KNDC1Q76NI1 1749 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM170AA1A519 330 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TYW5A2RUC4 315 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM172BPA6NC97 362 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 WIPF3A6NGB9 483 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DRGXA6NNA5 263 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 H7C0C1 242 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TRAFD1O14545 582 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FYB1O15117 783 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CLOCKO15516 846 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TRMUO75648 421 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 SUN1O94901 812 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 UNC5CO95185 931 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 EPN2O95208 641 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 IFNA14P01570 189 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 PFKMP08237 780 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 RPS17P08708 135 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DLATP10515 647 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ITGAXP20702 1163 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MUTP22033 750 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CXCR2P25025 360 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 GJB2P29033 226 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 STX2P32856 288 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT2P35908 639 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 GPR15P49685 360 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FXR1P51114 621 aaKnown RBP eCLIP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 PEX3P56589 373 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 NUP107P57740 925 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 GSTO1P78417 241 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 XIAPP98170 497 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ECT2LQ008S8 904 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC34A1Q06495 639 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ENPEPQ07075 957 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 SCRN3Q0VDG4 424 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 GRSF1Q12849 480 aaKnown RBP eCLIP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ACAP2Q15057 778 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 SF3B4Q15427 424 aaKnown RBP eCLIP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC6Q16204 474 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 NFIL3Q16649 462 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ZC2HC1CQ53FD0 456 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ALFQ53S48 1182 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms