RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ZNF208O43345 1280 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 SRCP12931 536 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FSHRP23945 695 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 HNF4AP41235 474 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FAAP100Q0VG06 881 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 DGLUCYQ7Z3D6 616 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 INTS7Q9NVH2 962 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 DMTF1Q9Y222 760 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 BHMG1C9JSJ3 638 aaPredicted RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 BPNT1O95861 308 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 CYP2B6P20813 491 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 AZGP1P25311 298 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 RCAN1P53805 252 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 SMIM11AP58511 58 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 PFKFB4Q16877 469 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 DNAJA4Q8WW22 397 aaPredicted RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 CKAP2Q8WWK9 683 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 QRFPRQ96P65 431 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 KLHL5Q96PQ7 755 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 PRRG4Q9BZD6 226 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 CCDC86Q9H6F5 360 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FLT1P17948 1338 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 TAS2R41P59536 307 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 TSPAN5P62079 268 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 E2F2Q14209 437 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 DHDDSQ86SQ9 333 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 SRFBP1Q8NEF9 429 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 IFT46Q9NQC8 304 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 HIF3AQ9Y2N7 669 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FFAR3O14843 346 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 GPR42O15529 346 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 HMGCRP04035 888 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 SMIM5Q71RC9 77 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 FUKQ8N0W3 1084 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 GALNT6Q8NCL4 622 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 PTCD3Q96EY7 689 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 SLC47A1Q96FL8 570 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 ZCCHC2Q9C0B9 1178 aaKnown RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 MTF2Q9Y483 593 aaPredicted RBP13.79□□□□□ -0.2
LRRK1-202ENST00000525284 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
LRRK1-202ENST00000525284 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 VDRP11473 427 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 PON1P27169 355 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 CCR3P51677 355 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 ERMAPQ96PL5 475 aaPredicted RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 PLA2R1Q13018 1463 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 KPNA3O00505 521 aaPredicted RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 GNAO1P09471 354 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 CDH4P55283 916 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 CA9Q16790 459 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 NDNQ99608 321 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 ATG10Q9H0Y0 220 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 STARD7Q9NQZ5 370 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 A0A087WZ62 844 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 NRP2O60462 931 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 GATBO75879 557 aaKnown RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 GLI1P08151 1106 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 LHCGRP22888 699 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 CCNG2Q16589 344 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 PTPN20Q4JDL3 420 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 NKD1Q969G9 470 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 TBL1YQ9BQ87 522 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 ACE2Q9BYF1 805 aaPredicted RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 ALG9Q9H6U8 611 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 A0A087X1B8 175 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 ERVK-24P63145 666 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 MAPKAPK3Q16644 382 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 POMZP3Q6PJE2 187 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 TRAPPC5Q8IUR0 188 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 GAL3ST1Q99999 423 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 KIAA1683Q9H0B3 1180 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 TMLHEQ9NVH6 421 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 SNRPB2P08579 225 aaKnown RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 APTXQ7Z2E3 356 aaKnown RBP13.78□□□□□ -0.2
LRRK1-202ENST00000525284 GALNT5Q7Z7M9 940 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 GPR156Q8NFN8 814 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 SPAG4Q9NPE6 437 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
LRRK1-202ENST00000525284 CYP11B1P15538 503 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 CTXN3Q4LDR2 81 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 PPP1R26Q5T8A7 1209 aaPredicted RBP13.77□□□□□ -0.2
LRRK1-202ENST00000525284 NELL1Q92832 810 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 LRMDAQ9H2I8 198 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 TBX20Q9UMR3 447 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 427.1 ms