RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 OGDHQ02218 1023 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 BNIP3Q12983 259 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 SGCGQ13326 291 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 SERINC3Q13530 473 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 GRM3Q14832 879 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 MYLK3Q32MK0 819 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 HS1BP3Q53T59 392 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 SEL1L3Q68CR1 1132 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 VPS36Q86VN1 386 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 PSTKQ8IV42 348 aaKnown RBP11.06□□□□□ -0.64
PVT1-216ENST00000523068 OR6K2Q8NGY2 324 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 ZNF653Q96CK0 615 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 IFT43Q96FT9 208 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 HMCESQ96FZ2 354 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 MYOCQ99972 504 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 CALN1Q9BXU9 219 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 DHX35Q9H5Z1 703 aaKnown RBP11.06□□□□□ -0.64
PVT1-216ENST00000523068 NOL6Q9H6R4 1146 aaKnown RBP11.06□□□□□ -0.64
PVT1-216ENST00000523068 FZD3Q9NPG1 666 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 KLHL11Q9NVR0 708 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 IFNKQ9P0W0 207 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
PVT1-216ENST00000523068 MFHAS1Q9Y4C4 1052 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 CEP295Q9C0D2 2601 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 AKAP13Q12802 2813 aa11.06□□□□□ -0.64
PVT1-216ENST00000523068 A0A1W2PQJ5 194 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 TMEM191CA6NGB0 347 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 ARHGAP42A6NI28 874 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 EEF2KO00418 725 aaKnown RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 DAPK3O43293 454 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 GKP32189 559 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 ILKQ13418 452 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 ACAP1Q15027 740 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 SMAD1Q15797 465 aaKnown RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 CCDC157Q569K6 752 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 TDRD12Q587J7 1177 aaKnown RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 GDPD4Q6W3E5 623 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 LEKR1Q6ZMV7 388 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 GCNT7Q6ZNI0 430 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 ABI3BPQ7Z7G0 1075 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 TTC7BQ86TV6 843 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 ASB12Q8WXK4 309 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 SYN2Q92777 582 aaPredicted RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 KLHL32Q96NJ5 620 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 LENG8Q96PV6 779 aaPredicted RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 CPEB1Q9BZB8 566 aaKnown RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 LRRC19Q9H756 370 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 UBA2Q9UBT2 640 aaPredicted RBP11.05□□□□□ -0.64
PVT1-216ENST00000523068 PCSK1NQ9UHG2 260 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 CA5BQ9Y2D0 317 aa11.05□□□□□ -0.64
PVT1-216ENST00000523068 LRRK1Q38SD2 2015 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 MYLKQ15746 1914 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.64
PVT1-216ENST00000523068 FPGTO14772 594 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 RFPL3O75679 317 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 SKILP12757 684 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 HNF1BP35680 557 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 ABL2P42684 1182 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 RABIFP47224 123 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 SUOXP51687 545 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 CLDN2P57739 230 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 ATXN7L2Q5T6C5 722 aaPredicted RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 E4F1Q66K89 784 aaPredicted RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 Q6ZSR6 202 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 KANSL1Q7Z3B3 1105 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 PTAR1Q7Z6K3 402 aaPredicted RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 TMPRSS12Q86WS5 348 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 DNAAF5Q86Y56 855 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 DENND6BQ8NEG7 585 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 HCAR2Q8TDS4 363 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.641e-6■□□□□ 9.2
PVT1-216ENST00000523068 SNRNP25Q9BV90 132 aaKnown RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 C1QTNF7Q9BXJ2 289 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 C1QTNF2Q9BXJ5 285 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 XPO4Q9C0E2 1151 aaKnown RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 CCDC86Q9H6F5 360 aaKnown RBP11.04□□□□□ -0.64
PVT1-216ENST00000523068 ZWILCHQ9H900 591 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 GPATCH2LQ9NWQ4 482 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 MYO1AQ9UBC5 1043 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 DKK3Q9UBP4 350 aa11.04□□□□□ -0.64
PVT1-216ENST00000523068 NEMP2A6NFY4 417 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 IGLON5A6NGN9 336 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 SRRM3A6NNA2 597 aaPredicted RBP11.03□□□□□ -0.64
PVT1-216ENST00000523068 H3BM21 787 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 NRDCO43847 1150 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 SDC3O75056 442 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 LRCH4O75427 683 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 SERPING1P05155 500 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 ALPPL2P10696 532 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 CKMT2P17540 419 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 XPAP23025 273 aaPredicted RBP11.03□□□□□ -0.64
PVT1-216ENST00000523068 DGKAP23743 735 aa11.03□□□□□ -0.64
PVT1-216ENST00000523068 MIPP30301 263 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms