RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 PTCRAQ6ISU1 281 aaPredicted RBP8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 PIGWQ7Z7B1 504 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 PRPF39Q86UA1 669 aaKnown RBP8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 PGBD5Q8N414 524 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 SLC44A3Q8N4M1 653 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 ZCCHC9Q8N567 271 aaKnown RBP8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 TTC16Q8NEE8 873 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 SPOCK2Q92563 424 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 BHMTQ93088 406 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 SEC16BQ96JE7 1060 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 MRGPRX3Q96LB0 322 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 POLR1EQ9GZS1 481 aaKnown RBP8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 CENPHQ9H3R5 247 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 RABEP2Q9H5N1 569 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 BRD9Q9H8M2 597 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 KCNK12Q9HB15 430 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 SLC2A4RGQ9NR83 387 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 DNAJC17Q9NVM6 304 aaKnown RBP8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 EURLQ9NYK6 297 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 SEPT10Q9P0V9 454 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 DEC1Q9P2X7 70 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 LGALS13Q9UHV8 139 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 AAR2Q9Y312 384 aaKnown RBP8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 STARD13Q9Y3M8 1113 aa8.07□□□□□ -1.12
IGHV7-40-201ENST00000520963 AP3B1O00203 1094 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 RASGRF2O14827 1237 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MUSKO15146 869 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 RGS16O15492 202 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ANXA9O76027 345 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 KIAA0754O94854 1291 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 TMCC1O94876 653 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 TMEM63AO94886 807 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 TTC4O95801 387 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 GSRP00390 522 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MT-CO1P00395 513 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ATP5BP06576 529 aaKnown RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MMP2P08253 660 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ABHD2P08910 425 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 DLDP09622 509 aaKnown RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 CHRM1P11229 460 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 SRCP12931 536 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 CHN1P15882 459 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 NFKB1P19838 968 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 PSMB4P28070 264 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ADRA1AP35348 466 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 GRIA2P42262 883 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MAPK8P45983 427 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 VPS41P49754 854 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 GEMP55040 296 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 AP1S1P61966 158 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ACTN3Q08043 901 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 NIPAL4Q0D2K0 466 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ENPP2Q13822 863 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 PRPSAP1Q14558 356 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ZNF235Q14590 738 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 E2F5Q15329 346 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 PTPRNQ16849 979 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 KCTD19Q17RG1 926 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 AAK1Q2M2I8 961 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ANKRD22Q5VYY1 191 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 KDELC1Q6UW63 502 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 PPP1R21Q6ZMI0 780 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ZNF534Q76KX8 674 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 RALGPS2Q86X27 583 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ZNF354CQ86Y25 554 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 OTUD6BQ8N6M0 293 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 PCDH20Q8N6Y1 951 aaKnown RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 TERB1Q8NA31 727 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MAFAQ8NHW3 353 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MDM1Q8TC05 714 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 KCNV2Q8TDN2 545 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 VOPP1Q96AW1 172 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 CHMP6Q96FZ7 201 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MYO19Q96H55 970 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 OXNAD1Q96HP4 312 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 AGAP3Q96P47 875 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 NUDCD1Q96RS6 583 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 MLPHQ9BV36 600 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 CEP41Q9BYV8 373 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 CDC42EP4Q9H3Q1 356 aaKnown RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 C8orf33Q9H7E9 229 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 LRRC40Q9H9A6 602 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ACTR5Q9H9F9 607 aaPredicted RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ARNT2Q9HBZ2 717 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 PPANQ9NQ55 473 aaKnown RBP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ELOVL2Q9NXB9 296 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 GTSE1Q9NYZ3 720 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 BCCIPQ9P287 314 aaKnown RBP eCLIP8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 LHX3Q9UBR4 397 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 LIMD1Q9UGP4 676 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 SLC25A13Q9UJS0 675 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ANAPC5Q9UJX4 755 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 ERVW-1Q9UQF0 538 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 COL4A2P08572 1712 aa8.06□□□□□ -1.12
IGHV7-40-201ENST00000520963 LOC285095A0A1B0GVY8 99 aa8.05□□□□□ -1.12
IGHV7-40-201ENST00000520963 TCRBV7S3A2A0A539 114 aa8.05□□□□□ -1.12
IGHV7-40-201ENST00000520963 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms