RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 HAO1Q9UJM8 370 aa7.79□□□□□ -1.16
LSM1-202ENST00000520286 ADAMTSL3P82987 1691 aa7.79□□□□□ -1.16
LSM1-202ENST00000520286 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 INPPL1O15357 1258 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 ERAL1O75616 437 aaKnown RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 RNF8O76064 485 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 OR2C1O95371 312 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 NR2F1P10589 423 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 INSRRP14616 1297 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 MCM3P25205 808 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 EIF2DP41214 584 aaKnown RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 UBA7P41226 1012 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 CDH8P55286 799 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 NIPAL4Q0D2K0 466 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 CSTF3Q12996 717 aaKnown RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 IRF3Q14653 427 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 PPP2R5BQ15173 497 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 RNPS1Q15287 305 aaKnown RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 ARMC3Q5W041 872 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 TSSK4Q6SA08 328 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 GSTA5Q7RTV2 222 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 CCDC25Q86WR0 208 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 PNLDC1Q8NA58 520 aaKnown RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 HDAC7Q8WUI4 952 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 LARP4BQ92615 738 aaKnown RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 KAT2AQ92830 837 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 ZNF304Q9HCX3 659 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 ASB6Q9NWX5 421 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 CHORDC1Q9UHD1 332 aaPredicted RBP7.78□□□□□ -1.16
LSM1-202ENST00000520286 MST1RQ04912 1400 aa7.78□□□□□ -1.16
LSM1-202ENST00000520286 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.77□□□□□ -1.17
LSM1-202ENST00000520286 SLC22A23A1A5C7 686 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 CCER2I3L3R5 266 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 CLTBP09497 229 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 CYP2A6P11509 494 aaPredicted RBP7.77□□□□□ -1.17
LSM1-202ENST00000520286 TNFRSF1AP19438 455 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 TFEBP19484 476 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 EDN2P20800 178 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 IL11P20809 199 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 GPD1P21695 349 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 GABRB2P47870 512 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 YPEL5P62699 121 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 LRMPQ12912 555 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 AIMP2Q13155 320 aaKnown RBP7.77□□□□□ -1.17
LSM1-202ENST00000520286 SPECC1Q5M775 1068 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 GKAP1Q5VSY0 366 aaPredicted RBP7.77□□□□□ -1.17
LSM1-202ENST00000520286 TBC1D9BQ66K14 1250 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 LRIG3Q6UXM1 1119 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 CYB5R4Q7L1T6 521 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 CCDC191Q8NCU4 936 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 TMEM170AQ8WVE7 144 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 MMABQ96EY8 250 aaPredicted RBP7.77□□□□□ -1.17
LSM1-202ENST00000520286 RRP7BPQ9NSQ0 103 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 WNT6Q9Y6F9 365 aa7.77□□□□□ -1.17
LSM1-202ENST00000520286 A0A1W2PRG0 241 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 TMEM191CA6NGB0 347 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 CBY3A6NI87 242 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 BTBD18B2RXH4 712 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 FAM157AC9JC47 383 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 DKC1O60832 514 aaKnown RBP eCLIP7.76□□□□□ -1.17
LSM1-202ENST00000520286 MCM7P33993 719 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 HIST2H2ACQ16777 129 aaPredicted RBP7.76□□□□□ -1.17
LSM1-202ENST00000520286 RAB41Q5JT25 222 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 ZNF627Q7L945 461 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 PRPF39Q86UA1 669 aaKnown RBP7.76□□□□□ -1.17
LSM1-202ENST00000520286 ZNF398Q8TD17 642 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 C1orf74Q96LT6 269 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 EFHD1Q9BUP0 239 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 DUSP26Q9BV47 211 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 NUF2Q9BZD4 464 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 IKZF4Q9H2S9 585 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 ACTR5Q9H9F9 607 aaPredicted RBP7.76□□□□□ -1.17
LSM1-202ENST00000520286 PDE7BQ9NP56 450 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 SLC6A13Q9NSD5 602 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 SPATS2LQ9NUQ6 558 aaKnown RBP7.76□□□□□ -1.17
LSM1-202ENST00000520286 DLGAP2Q9P1A6 1054 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 SUCLA2Q9P2R7 463 aaPredicted RBP7.76□□□□□ -1.17
LSM1-202ENST00000520286 MTMR6Q9Y217 621 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 CUL7Q14999 1698 aa7.76□□□□□ -1.17
LSM1-202ENST00000520286 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.75□□□□□ -1.17
LSM1-202ENST00000520286 A0A1W2PRQ8 180 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 A8MZ25 164 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 TAF4O00268 1085 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 SLC25A17O43808 307 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 NEURL1O76050 574 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 IPO7O95373 1038 aaKnown RBP7.75□□□□□ -1.17
LSM1-202ENST00000520286 NHLRC4P0CG21 123 aaPredicted RBP7.75□□□□□ -1.17
LSM1-202ENST00000520286 PTPN2P17706 415 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 YWHAQP27348 245 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 DPP6P42658 865 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
LSM1-202ENST00000520286 PGM5Q15124 567 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 SYTL3Q4VX76 610 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 FBLN7Q53RD9 439 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 GPR139Q6DWJ6 353 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 CPLX2Q6PUV4 134 aaKnown RBP7.75□□□□□ -1.17
LSM1-202ENST00000520286 Q6ZPA2 131 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 KIAA2013Q8IYS2 634 aa7.75□□□□□ -1.17
LSM1-202ENST00000520286 ZNF747Q9BV97 191 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms