RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 FTHL17Q9BXU8 183 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 RPF2Q9H7B2 306 aaKnown RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 CXorf21Q9HAI6 301 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 KANSL1LA0AUZ9 987 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 H3BMQ9 156 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 PORP16435 677 aaPredicted RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 CYP2B6P20813 491 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 ZBTB17Q13105 803 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 STRADAQ7RTN6 431 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 COG8Q96MW5 612 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 NPLQ9BXD5 320 aaPredicted RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 HIPK3Q9H422 1215 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 RHOJQ9H4E5 214 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 PAIP2BQ9ULR5 123 aaKnown RBP12.5□□□□□ -0.41
PCM1-203ENST00000517545 AURKCQ9UQB9 309 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 ANKRD6Q9Y2G4 727 aa12.5□□□□□ -0.41
PCM1-203ENST00000517545 MRASO14807 208 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 GIPC1O14908 333 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 VTNP04004 478 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 LMO2P25791 158 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 MATKP42679 507 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 MAPK10P53779 464 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 STX5Q13190 355 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TMEM26Q6ZUK4 368 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 NPWQ8N729 165 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ANKFN1Q8N957 763 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ANKRD52Q8NB46 1076 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 FBXL20Q96IG2 436 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TRPC5OSA6NMA1 111 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 EEF2KO00418 725 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 DCLK1O15075 740 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 UBDO15205 165 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCM1-203ENST00000517545 NFKB1P19838 968 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 KCNA5P22460 613 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 GJA9P57773 515 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TNFAIP2Q03169 654 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 BST2Q10589 180 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 TRAP1Q12931 704 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 TNFAIP1Q13829 316 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 AARS2Q5JTZ9 985 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 CHST15Q7LFX5 561 aaPredicted RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TBC1D15Q8TC07 691 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TRPC4APQ8TEL6 797 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ZMAT2Q96NC0 199 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 DNAI2Q9GZS0 605 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 IL1RL2Q9HB29 575 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 AS3MTQ9HBK9 375 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 SARDHQ9UL12 918 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ACOT9Q9Y305 439 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ATP6AP2A0A1C7CYW4 349 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ATP6AP2O75787 350 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ERCC2P18074 760 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 YWHAQP27348 245 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 LRPAP1P30533 357 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 PLK1P53350 603 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 PRKAA2P54646 552 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 RELAQ04206 551 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 BNIP3Q12983 259 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 PAFAH1B3Q15102 231 aaKnown RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 SLC25A52Q3SY17 297 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 OFCC1Q8IZS5 231 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TCF12Q99081 682 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 ADI1Q9BV57 179 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TBC1D23Q9NUY8 699 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 SELENONQ9NZV5 590 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TMEM181Q9P2C4 612 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 RCOR3Q9P2K3 495 aaPredicted RBP12.49□□□□□ -0.41
PCM1-203ENST00000517545 TUBGCP4Q9UGJ1 667 aa12.49□□□□□ -0.41
PCM1-203ENST00000517545 TRIM64CA6NLI5 447 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 ZBTB11O95625 1053 aaPredicted RBP12.48□□□□□ -0.41
PCM1-203ENST00000517545 BMP2P12643 396 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 EDNRBP24530 442 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 HMOX2P30519 316 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 SNX16P57768 344 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 YBX1P67809 324 aaKnown RBP12.48□□□□□ -0.41
PCM1-203ENST00000517545 ZNF618Q5T7W0 954 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 SYPL2Q5VXT5 272 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 TANKQ92844 425 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 C18orf25Q96B23 403 aaPredicted RBP12.48□□□□□ -0.41
PCM1-203ENST00000517545 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 SPATA33Q96N06 139 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 EFHD1Q9BUP0 239 aa12.48□□□□□ -0.41
PCM1-203ENST00000517545 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms