RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 SF3A3Q12874 501 aaKnown RBP eCLIP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 MPP2Q14168 576 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 GALNT3Q14435 633 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 RFTN1Q14699 578 aaPredicted RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 SHHQ15465 462 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 SLC1A5Q15758 541 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 ZKSCAN8Q15776 578 aaPredicted RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 FSCBQ5H9T9 825 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 SIRPB2Q5JXA9 342 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 TEDDM1Q5T9Z0 273 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PDE12Q6L8Q7 609 aaKnown RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PKN3Q6P5Z2 889 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 LINGO4Q6UY18 593 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 RANBP10Q6VN20 620 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 ZNF783Q6ZMS7 281 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 Q6ZNB5 142 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 HTR3DQ70Z44 454 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 CYS1Q717R9 158 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 RTL10Q7L3V2 364 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 GRASPQ7Z6J2 395 aaPredicted RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 RNF135Q8IUD6 432 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 CMTM8Q8IZV2 173 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 NDUFAF2Q8N183 169 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 CPXM2Q8N436 756 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 BANPQ8N9N5 519 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 CCDC63Q8NA47 563 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 LEMD2Q8NC56 503 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 SHKBP1Q8TBC3 707 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 WFDC5Q8TCV5 224 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 TCP10LQ8TDR4 215 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 LRRC8CQ8TDW0 803 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 ADAMTS19Q8TE59 1207 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 SH3RF2Q8TEC5 729 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 MZB1Q8WU39 189 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PDCD6IPQ8WUM4 868 aaKnown RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PTCD2Q8WV60 388 aaKnown RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 CKAP2Q8WWK9 683 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 ING5Q8WYH8 240 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PTPRN2Q92932 1015 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 ZNF419Q96HQ0 510 aaPredicted RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 FEM1CQ96JP0 617 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 EXOC2Q96KP1 924 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 TSNARE1Q96NA8 513 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 FAM111AQ96PZ2 611 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 ELAC2Q9BQ52 826 aaKnown RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 KIFC1Q9BW19 673 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PRKD2Q9BZL6 878 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 C12orf65Q9H3J6 166 aaKnown RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 TASP1Q9H6P5 420 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 TLE6Q9H808 572 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PDFQ9HBH1 243 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 PLAC1Q9HBJ0 212 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 MRM3Q9HC36 420 aaKnown RBP6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 TBC1D30Q9Y2I9 924 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 SCN2AQ99250 2005 aa6.03□□□□□ -1.44
RN7SKP288-201ENST00000516227 HEATR5BQ9P2D3 2071 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 COL4A3Q01955 1670 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 PLXND1Q9Y4D7 1925 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ZCWPW2A0A1B0GU75 182 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 E2F8A0AVK6 867 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 CCDC85CA6NKD9 419 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ZNF197O14709 1029 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TPP1O14773 563 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 MUSKO15146 869 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 INSIG1O15503 277 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TIMM44O43615 452 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TYROBPO43914 113 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 GJB3O75712 270 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TMCC1O94876 653 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ARHGEF15O94989 841 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 NDST3O95803 873 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 C1QAP02745 245 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 FGF1P05230 155 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ITGA2BP08514 1039 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 F7P08709 466 aaPredicted RBP6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 PIRTP0C851 137 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ALADP13716 330 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 HLA-DPA1P20036 260 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 DRD4P21917 467 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 CCR2P41597 374 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 MAGEA10P43363 369 aaPredicted RBP6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ABCG1P45844 678 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 SLC18A1P54219 525 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 EPHB1P54762 984 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 CSE1LP55060 971 aaKnown RBP6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 WDR4P57081 412 aaKnown RBP6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ERVK-21P61565 698 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 PRAMEP78395 509 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 IRX4P78413 519 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TMPRSS15P98073 1019 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ZXDBP98169 803 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 SLC18A2Q05940 514 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TNK2Q07912 1038 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 LAMB3Q13751 1172 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 CYTH1Q15438 398 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 QPCTQ16769 361 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 ACCSLQ4AC99 568 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 TSTD2Q5T7W7 516 aa6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 GKAP1Q5VSY0 366 aaPredicted RBP6.02□□□□□ -1.45
RN7SKP288-201ENST00000516227 FAM109BQ6ICB4 259 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms