RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 GKN1Q9NS71 199 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 TREX1Q9NSU2 369 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 ZFATQ9P243 1243 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 DCDC2Q9UHG0 476 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 STARD13Q9Y3M8 1113 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 TCAF1Q9Y4C2 921 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 NYNRINQ9P2P1 1898 aaKnown RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 MYO7AQ13402 2215 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 HEATR9A2RTY3 570 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 C2orf71A6NGG8 1288 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 TCP11X1B4DZS4 312 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 COPEO14579 308 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 GRM6O15303 877 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 BIRC5O15392 142 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 TIMM44O43615 452 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 ATP9BO43861 1147 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 PAPLNO95428 1278 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 GSTA1P08263 222 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 ITGA2BP08514 1039 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 VIMP08670 466 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 MBL2P11226 248 aaPredicted RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 PAMP19021 973 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 CR2P20023 1033 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 HLA-DPA1P20036 260 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 FOXN2P32314 431 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 ACVRL1P37023 503 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 ARCN1P48444 511 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 SERPINH1P50454 418 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 CSRP3P50461 194 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 LIMK2P53671 638 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 CRADDP78560 199 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 SEPT7Q16181 437 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 QPCTQ16769 361 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 UGP2Q16851 508 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 LVRNQ6Q4G3 990 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 KIAA0408Q6ZU52 694 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 GAREM2Q75VX8 874 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 HJURPQ8NCD3 748 aaPredicted RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 CCDC197Q8NCU1 140 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 PPHLN1Q8NEY8 458 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 IPMKQ8NFU5 416 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 POF1BQ8WVV4 589 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 MRRFQ96E11 262 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 MFSD3Q96ES6 412 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 PRICKLE1Q96MT3 831 aaPredicted RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 SAMD11Q96NU1 681 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 TGS1Q96RS0 853 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 RBBP8Q99708 897 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 C19orf43Q9BQ61 176 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 TCF25Q9BQ70 676 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 FICDQ9BVA6 458 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 FSD1LQ9BXM9 530 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 NT5MQ9NPB1 228 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 CHRAC1Q9NRG0 131 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 LMCD1Q9NZU5 365 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 TXNDC16Q9P2K2 825 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 DNMT3BQ9UBC3 853 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 LSM7Q9UK45 103 aaKnown RBP10.33□□□□□ -0.76
SNF8-214ENST00000515174 GRID1Q9ULK0 1009 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 NOTCH4Q99466 2003 aa10.33□□□□□ -0.76
SNF8-214ENST00000515174 BRWD1Q9NSI6 2320 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 TYW5A2RUC4 315 aaKnown RBP10.32□□□□□ -0.76
SNF8-214ENST00000515174 MROH6A6NGR9 719 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 F5H423 210 aaPredicted RBP10.32□□□□□ -0.76
SNF8-214ENST00000515174 UGT1A9O60656 530 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 PMPCBO75439 489 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 PIAS1O75925 651 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 GLUD1P00367 558 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 MPOP05164 745 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 FGF1P05230 155 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 C8AP07357 584 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 RHOCP08134 193 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 HNRNPA1P09651 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNF8-214ENST00000515174 ERVK-10P10266 1014 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 TCF3P15923 654 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 GABRR2P28476 465 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 IRS1P35568 1242 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 PLK1P53350 603 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 ERVFC1P60507 584 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 ERVK-21P61565 698 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 RPS24P62847 133 aaKnown RBP10.32□□□□□ -0.76
SNF8-214ENST00000515174 NHLH1Q02575 133 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 ACVR1Q04771 509 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 OLIG2Q13516 323 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 LRRC14Q15048 493 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 LEXMQ3ZCV2 418 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 FYB2Q5VWT5 728 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 CXorf57Q6NSI4 855 aaKnown RBP10.32□□□□□ -0.76
SNF8-214ENST00000515174 RFWD3Q6PCD5 774 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 FOXR1Q6PIV2 292 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 METTL3Q86U44 580 aaKnown RBP10.32□□□□□ -0.76
SNF8-214ENST00000515174 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 PGBD5Q8N414 524 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 ZNF398Q8TD17 642 aa10.32□□□□□ -0.76
SNF8-214ENST00000515174 CALML6Q8TD86 181 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms