RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 CCNHP51946 323 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 GEMP55040 296 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 AP1S1P61966 158 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 BASP1P80723 227 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 GUCY2DQ02846 1103 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 MPP3Q13368 585 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 FZD5Q13467 585 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 LRRC32Q14392 662 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 HSF5Q4G112 596 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 C2orf27AQ580R0 203 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 C9orf64Q5T6V5 341 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 FAXCQ5TGI0 409 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 KCTD11Q693B1 232 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 SDE2Q6IQ49 451 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 SYNPOQ8N3V7 929 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDPN-210ENST00000513143 ZNF366Q8N895 744 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 CPT1BQ92523 772 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 UBXN4Q92575 508 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 VOPP1Q96AW1 172 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 SNF8Q96H20 258 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 UHRF1Q96T88 793 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 GABRG3Q99928 467 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 MLPHQ9BV36 600 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 CPEB1Q9BZB8 566 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 MTG2Q9H4K7 406 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 TBC1D17Q9HA65 648 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 VPS45Q9NRW7 570 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 WHRNQ9P202 907 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 FAM153AQ9UHL3 310 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 TPX2Q9ULW0 747 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 SNX24Q9Y343 169 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 MTF2Q9Y483 593 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 VCANP13611 3396 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.67□□□□□ -0.38
PDPN-210ENST00000513143 GOLGA6CA6NDK9 693 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 GOLGA6BA6NDN3 693 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 NDC80O14777 642 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 TP73O15350 636 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 ADAM23O75077 832 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 SIN3BO75182 1162 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 KLF8O95600 359 aaPredicted RBP12.67□□□□□ -0.38
PDPN-210ENST00000513143 EPHX1P07099 455 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 APRTP07741 180 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 GOLGA6DP0CG33 693 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 ITIH2P19823 946 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 TPSB2P20231 275 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 WASP42768 502 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 CDK16Q00536 496 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 RAD51Q06609 339 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 SIGLEC14Q08ET2 396 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 KCNJ11Q14654 390 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 GRM3Q14832 879 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 UBXN2BQ14CS0 331 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 TRADDQ15628 312 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 TPSAB1Q15661 275 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 IZUMO3Q5VZ72 239 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 KDELC1Q6UW63 502 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 PPIL6Q8IXY8 311 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 RYBPQ8N488 228 aaPredicted RBP12.67□□□□□ -0.38
PDPN-210ENST00000513143 NAT8LQ8N9F0 302 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 CHST14Q8NCH0 376 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 BBOF1Q8ND07 529 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 OR6K2Q8NGY2 324 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 RPLP0P6Q8NHW5 317 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 EDAQ92838 391 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 TUBGCP5Q96RT8 1024 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 HINFPQ9BQA5 517 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 HEPHQ9BQS7 1158 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 OSBPL6Q9BZF3 934 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 DPH5Q9H2P9 285 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 ANKZF1Q9H8Y5 726 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 LMAN1LQ9HAT1 526 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 PRSS16Q9NQE7 514 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 GDF3Q9NR23 364 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 EIF2B3Q9NR50 452 aaKnown RBP12.67□□□□□ -0.38
PDPN-210ENST00000513143 GOLGA6AQ9NYA3 693 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 GRHL1Q9NZI5 618 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 UBP1Q9NZI7 540 aa12.67□□□□□ -0.38
PDPN-210ENST00000513143 TCRBV7S3A2A0A539 114 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 FAM170BA6NMN3 283 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 E7EVH7 732 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ALOX15BO15296 676 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 BNIP3LO60238 219 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 PMPCBO75439 489 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 SUN1O94901 812 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 AP2A1O95782 977 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 GKP32189 559 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ADRA1AP35348 466 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 ITGA8P53708 1063 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 WNT3AP56704 352 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 BCL2L1Q07817 233 aa12.66□□□□□ -0.38
PDPN-210ENST00000513143 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
PDPN-210ENST00000513143 ELAVL3Q14576 367 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms