RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 STEAP3Q658P3 488 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 XAF1Q6GPH4 301 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 PM20D1Q6GTS8 502 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 TTBK2Q6IQ55 1244 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 STYK1Q6J9G0 422 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 HMBOX1Q6NT76 420 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 TATDN1Q6P1N9 297 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 ZNF773Q6PK81 442 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 SLC16A12Q6ZSM3 486 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 PLEKHM3Q6ZWE6 761 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 ARCQ7LC44 396 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 FBXO11Q86XK2 927 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 WDR49Q8IV35 697 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 CCDC185Q8N715 623 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 FBXO36Q8NEA4 188 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 SHCBP1Q8NEM2 672 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 OR2T34Q8NGX1 318 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 RHOXF1Q8NHV9 184 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 FAM110BQ8TC76 370 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 FANK1Q8TC84 345 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 CPA5Q8WXQ8 436 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 LPGAT1Q92604 370 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 MOCOSQ96EN8 888 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 BTN2A3PQ96KV6 586 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 RIPOR3Q96MK2 946 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 DACH2Q96NX9 599 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 NT5C1BQ96P26 610 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 FUNDC2Q9BWH2 189 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 MUC3BQ9H195 1237 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 MKNK2Q9HBH9 465 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 MCCC2Q9HCC0 563 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 SLC35C2Q9NQQ7 365 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 IL37Q9NZH6 218 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 TFCP2L1Q9NZI6 479 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 WARS2Q9UGM6 360 aaKnown RBP7.4□□□□□ -1.23
CPNE4-208ENST00000511604 ENOPH1Q9UHY7 261 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.4□□□□□ -1.23
CPNE4-208ENST00000511604 KCPQ6ZWJ8 1503 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 CACNA1SQ13698 1873 aa7.4□□□□□ -1.23
CPNE4-208ENST00000511604 MN1Q10571 1320 aaPredicted RBP7.4□□□□□ -1.23
CPNE4-208ENST00000511604 TRAV6A0A075B6T7 132 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 CXorf49A8MYA2 514 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 STX16-NPEPL1H3BU86 382 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ABCB7O75027 752 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 AVILO75366 819 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 VNN1O95497 513 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 YES1P07947 543 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 RETP07949 1114 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 PSKH1P11801 424 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ATF7P17544 494 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ATF3P18847 181 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 TCN1P20061 433 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 CYP3A5P20815 502 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 MAPK4P31152 587 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 CDH5P33151 784 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 DBPQ10586 325 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 TYSND1Q2T9J0 566 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 CATSPEREQ5SY80 951 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 HYIQ5T013 277 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 C1orf220Q5T0J3 134 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SYCE2Q6PIF2 218 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ARSKQ6UWY0 536 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 RHPN2Q8IUC4 686 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SLC9A9Q8IVB4 645 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 THNSL1Q8IYQ7 743 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 OFCC1Q8IZS5 231 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 CELF2-AS1Q8N7Q2 184 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 PIK3C3Q8NEB9 887 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ZFPM2Q8WW38 1151 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 MCRS1Q96EZ8 462 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 FBXL20Q96IG2 436 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 RNF170Q96K19 258 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 FAM84BQ96KN1 310 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SLC4A9Q96Q91 983 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 UHRF1Q96T88 793 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 YTHDF1Q9BYJ9 559 aaKnown RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 C2orf40Q9H1Z8 148 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 FAM96AQ9H5X1 160 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ACSS2Q9NR19 701 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 GLTPQ9NZD2 209 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 IFT80Q9P2H3 777 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 EIF3KQ9UBQ5 218 aaKnown RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SNX7Q9UNH6 387 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 PCDHGA7Q9Y5G6 932 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SNX8Q9Y5X2 465 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 DLEC1Q9Y238 1755 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 C2orf81A6NN90 581 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 E7ENX8 843 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SULT1B1O43704 296 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SYNCRIPO60506 623 aaKnown RBP7.39□□□□□ -1.23
CPNE4-208ENST00000511604 TOM1L1O75674 476 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 CDK14O94921 469 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 IFNA16P05015 189 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 ITGB3P05106 788 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 RALBP11234 206 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 BMP1P13497 986 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 SHMT1P34896 483 aa7.39□□□□□ -1.23
CPNE4-208ENST00000511604 HNF1BP35680 557 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms