RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SLC29A3Q9BZD2 475 aa3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 RANBP17Q9H2T7 1088 aaKnown RBP3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 FOXP1Q9H334 677 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 FZD3Q9NPG1 666 aa3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 BTBD3Q9Y2F9 522 aa3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 ADGRF5Q8IZF2 1346 aa3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 SETD1BQ9UPS6 1966 aaKnown RBP3.6□□□□□ -1.83
TRAPPC11-207ENST00000511409 A0A0G2JK05 382 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 LRRC53A6NM62 1247 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 EIF3CLB5ME19 914 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 TMEM63AO94886 807 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 MMP3P08254 477 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PCNAP12004 261 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 ENO3P13929 434 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PRF1P14222 555 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PTPN2P17706 415 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 CTPS1P17812 591 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 LMO1P25800 156 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PTGER1P34995 402 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 RGS2P41220 211 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 RXRGP48443 463 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PPP3CCP48454 512 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 GNAQP50148 359 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 CDH12P55289 794 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 HDAC4P56524 1084 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 RPS3AP61247 264 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 SETQ01105 290 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PKP1Q13835 747 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 HIST2H2ACQ16777 129 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 EPHA10Q5JZY3 1008 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 HYIQ5T013 277 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 ATG9BQ674R7 924 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 NUGGCQ68CJ6 796 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 NCAPH2Q6IBW4 605 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 TMEM71Q6P5X7 295 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 COLCA1Q6ZS62 124 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC16A12Q6ZSM3 486 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 MRPL10Q7Z7H8 261 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 TDRPQ86YL5 185 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 ANKRD52Q8NB46 1076 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 KDM1BQ8NB78 822 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 ADAMTS15Q8TE58 950 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 TMEM170AQ8WVE7 144 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 LPAR1Q92633 364 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC25A28Q96A46 364 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 MSI2Q96DH6 328 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 NR1H4Q96RI1 486 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 YME1L1Q96TA2 773 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PIP5K1AQ99755 562 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 H2AFJQ9BTM1 129 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 POLDIP3Q9BY77 421 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 DIAPH3Q9NSV4 1193 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 MAP3K20Q9NYL2 800 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 PCDHA12Q9UN75 941 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 FAM96BQ9Y3D0 163 aa3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 LAS1LQ9Y4W2 734 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-207ENST00000511409 IGLV5-39A0A0G2JS06 123 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PGPEP1LA6NFU8 196 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 DNAJC9-AS1A6NH13 148 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 NPIPB15A6NHN6 443 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 H0YGN5 161 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 INO80B-WBP1J3KQ70 363 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 MDM4O15151 490 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 LDLRAD4O15165 306 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 USO1O60763 962 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 HNRNPCL1O60812 293 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZBED4O75132 1171 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ATG13O75143 517 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 SEC14L2O76054 403 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 SEC31AO94979 1220 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CLDN7O95471 211 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CLEC3BP05452 202 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 MYZAPP0CAP1 466 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CHRNB2P17787 502 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 NFKBIAP25963 317 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ARL3P36405 182 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CPOXP36551 454 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CASP2P42575 452 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 EFNA5P52803 228 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CLDN2P57739 230 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 KRTAP10-11P60412 298 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 DCAF7P61962 342 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 RPL7AP62424 266 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 SSBP2P81877 361 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PPATQ06203 517 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 GOLGA8DPQ0D2H9 430 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ITGADQ13349 1161 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PTGR1Q14914 329 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 ARHGEF6Q15052 776 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 GSTA3Q16772 222 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 PRTGQ2VWP7 1150 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 GPATCH4Q5T3I0 446 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 LRRC8EQ6NSJ5 796 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 CDC73Q6P1J9 531 aa3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMED8Q6PL24 325 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-207ENST00000511409 GSTA5Q7RTV2 222 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms