RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, human

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-210	ENST00000509576	CCDC185	Q8N715	623 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	TMEM35B	Q8NCS4	154 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	MAPK15	Q8TD08	544 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	GPT2	Q8TD30	523 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	LMX1A	Q8TE12	382 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	FAM81B	Q96LP2	452 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	CCDC114	Q96M63	670 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	NDST4	Q9H3R1	872 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	SYNC	Q9H7C4	482 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	DYRK4	Q9NR20	520 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	HECA	Q9UBI9	543 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	DNAI1	Q9UI46	699 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	CSNK1G3	Q9Y6M4	447 aa		13.59	□□□□□ -0.23
DDX41-210	ENST00000509576	CPED1	A4D0V7	1026 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	ERVH48-1	M5A8F1	160 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	INSIG1	O15503	277 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	KLK10	O43240	276 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	UGT2B4	P06133	528 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	RABIF	P47224	123 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	HDAC4	P56524	1084 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	ERVPABLB-1	P60509	514 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	RAPGEF1	Q13905	1077 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	TCEA2	Q15560	299 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	CDO1	Q16878	200 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	VWA3B	Q502W6	1294 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	KIAA1614	Q5VZ46	1190 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	B3GNT8	Q7Z7M8	397 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	PYROXD2	Q8N2H3	581 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	KCNE4	Q8WWG9	221 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	FEM1C	Q96JP0	617 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	KLHL32	Q96NJ5	620 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	SLC46A1	Q96NT5	459 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	GAN	Q9H2C0	597 aa		13.58	□□□□□ -0.24
DDX41-210	ENST00000509576	SDK2	Q58EX2	2172 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576		F8VZ95	297 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	MUSK	O15146	869 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	MMP20	O60882	483 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	LRIG2	O94898	1065 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	FGFR1OP	O95684	399 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	F9	P00740	461 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	UCHL3	P15374	230 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	ADRA1B	P35368	520 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	TMPRSS3	P57727	454 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	FMO1	Q01740	532 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	NRG1	Q02297	640 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	CLN3	Q13286	438 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	ZNF805	Q5CZA5	627 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	RETSAT	Q6NUM9	610 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	LRRC31	Q6UY01	552 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	ZNF605	Q86T29	641 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	VPS36	Q86VN1	386 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	ZSWIM9	Q86XI8	627 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	DCP2	Q8IU60	420 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	PLPP6	Q8IY26	295 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	PHACTR4	Q8IZ21	702 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	SLC30A5	Q8TAD4	765 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	RXFP2	Q8WXD0	754 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	ASB12	Q8WXK4	309 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	ISG20	Q96AZ6	181 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	PPP1R16A	Q96I34	528 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	NSMCE3	Q96MG7	304 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	PCDHB18P	Q96TA0	734 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	TUBGCP2	Q9BSJ2	902 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	DUSP23	Q9BVJ7	150 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	SAMSN1	Q9NSI8	373 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	TMEM248	Q9NWD8	314 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	OR12D3	Q9UGF7	316 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	SALL4	Q9UJQ4	1053 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	COQ6	Q9Y2Z9	468 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	SPEN	Q96T58	3664 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	COL12A1	Q99715	3063 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	MAST4	O15021	2626 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	HECTD1	Q9ULT8	2610 aa		13.57	□□□□□ -0.24
DDX41-210	ENST00000509576	TLN1	Q9Y490	2541 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	NEMP2	A6NFY4	417 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	C2CD4B	A6NLJ0	364 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	KRIT1	O00522	736 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	NTN3	O00634	580 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	YY2	O15391	372 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	TSPAN6	O43657	245 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	CYP1A1	P04798	512 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	ALPPL2	P10696	532 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	TIMP2	P16035	220 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	TSHR	P16473	764 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	RECQL	P46063	649 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	ADK	P55263	362 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	SLC20A2	Q08357	652 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	MYLK3	Q32MK0	819 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	PRRT3	Q5FWE3	981 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	SMYD5	Q6GMV2	418 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	ARC	Q7LC44	396 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	DENND6B	Q8NEG7	585 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	OR2AP1	Q8NGE2	309 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	CENPI	Q92674	756 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	USP29	Q9HBJ7	922 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	LHX3	Q9UBR4	397 aa		13.56	□□□□□ -0.24
DDX41-210	ENST00000509576	APOBEC3B	Q9UH17	382 aa	Known RBP	13.56	□□□□□ -0.24

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