RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 MNAT1P51948 309 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 EPHB3P54753 998 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 SLC12A2P55011 1212 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 OXCT1P55809 520 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 RAB10P61026 200 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 ABCE1P61221 599 aaKnown RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 ACVR1Q04771 509 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 ITKQ08881 620 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 OVGP1Q12889 678 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 ZNF177Q13360 481 aaPredicted RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 OLIG2Q13516 323 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 USP10Q14694 798 aaKnown RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 TRIM60Q495X7 471 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 FAM182AQ5T1J6 154 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 NADSYN1Q6IA69 706 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 ZYG11AQ6WRX3 759 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 DEFB128Q7Z7B8 93 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 TBC1D1Q86TI0 1168 aaPredicted RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 MTDHQ86UE4 582 aaKnown RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 ARID3BQ8IVW6 561 aaPredicted RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 ARHGAP24Q8N264 748 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 RFWD2Q8NHY2 731 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 CCDC126Q96EE4 140 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 IFT43Q96FT9 208 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 ZNF419Q96HQ0 510 aaPredicted RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 NSL1Q96IY1 281 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 PSKH2Q96QS6 385 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 MGME1Q9BQP7 344 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 MECRQ9BV79 373 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 MMADHCQ9H3L0 296 aaPredicted RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 MFSD1Q9H3U5 465 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 TLE6Q9H808 572 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 RC3H2Q9HBD1 1191 aaKnown RBP9.34□□□□□ -0.91
HTT-205ENST00000509043 MRGBPQ9NV56 204 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 TMEM39AQ9NV64 488 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 DNAJC28Q9NX36 388 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 TMEM216Q9P0N5 145 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 FBXO5Q9UKT4 447 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 TBC1D30Q9Y2I9 924 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 YIPF1Q9Y548 306 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 PCDHB12Q9Y5F1 795 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 GREB1Q4ZG55 1949 aa9.34□□□□□ -0.91
HTT-205ENST00000509043 ZNF638Q14966 1978 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 MICAL3Q7RTP6 2002 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 CCDC189A1A4V9 331 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 TYW5A2RUC4 315 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 CHUKO15111 745 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 COCHO43405 550 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 KLHL2O95198 593 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 NDST3O95803 873 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 AHSGP02765 367 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 MMP2P08253 660 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 HMBSP08397 361 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 PSMA3P25788 255 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 SERPINB3P29508 390 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 SF3A3Q12874 501 aaKnown RBP eCLIP9.33□□□□□ -0.92
HTT-205ENST00000509043 MSLNQ13421 630 aaPredicted RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 SEPT6Q14141 434 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 GRM3Q14832 879 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 CNGA3Q16281 694 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 SPOUT1Q5T280 376 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 LIPMQ5VYY2 423 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 METTL21CQ5VZV1 264 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 ESRP1Q6NXG1 681 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
HTT-205ENST00000509043 RAPH1Q70E73 1250 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 METTL3Q86U44 580 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 GPR150Q8NGU9 434 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 PDCD6IPQ8WUM4 868 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 USP13Q92995 863 aaPredicted RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 C19orf43Q9BQ61 176 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 MRPL57Q9BQC6 102 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 VN1R3Q9BXE9 311 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 KLF16Q9BXK1 252 aaPredicted RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 ACE2Q9BYF1 805 aaPredicted RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 CYP4F11Q9HBI6 524 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 POPDC3Q9HBV1 291 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 OXSMQ9NWU1 459 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 SLC17A6Q9P2U8 582 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 UBA2Q9UBT2 640 aaPredicted RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 GGT7Q9UJ14 662 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 ZNF510Q9Y2H8 683 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 DOCK4Q8N1I0 1966 aa9.33□□□□□ -0.92
HTT-205ENST00000509043 MYO18AQ92614 2054 aaKnown RBP9.33□□□□□ -0.92
HTT-205ENST00000509043 NYNRINQ9P2P1 1898 aaKnown RBP9.32□□□□□ -0.92
HTT-205ENST00000509043 FAM95CA0A1B0GW59 222 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 G3V2L1 256 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 H3BNC9 293 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 FCHO1O14526 889 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 PRRG1O14668 218 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 PFDN6O15212 129 aa9.32□□□□□ -0.92
HTT-205ENST00000509043 ADAM12O43184 909 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms