RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 MLF2Q15773 248 aaPredicted RBP5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 LPAL2Q16609 132 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 SLC44A4Q53GD3 710 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 PARM1Q6UWI2 310 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 ZDHHC24Q6UX98 284 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 B3GALNT2Q8NCR0 500 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 STAMQ92783 540 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 CAVIN3Q969G5 261 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 FAM136AQ96C01 138 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 ZNF668Q96K58 619 aaPredicted RBP5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 MXRA8Q9BRK3 442 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 SDF4Q9BRK5 362 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 PTDSS2Q9BVG9 487 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 ACTRT3Q9BYD9 372 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 TPSD1Q9BZJ3 242 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 NT5C3AQ9H0P0 336 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 NUP62CLQ9H1M0 184 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 IKZF4Q9H2S9 585 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 PSTPIP2Q9H939 334 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 AGO4Q9HCK5 861 aaKnown RBP5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 LTB4R2Q9NPC1 389 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 GMEB2Q9UKD1 530 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 PACSIN3Q9UKS6 424 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 SHOC2Q9UQ13 582 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 DMTF1Q9Y222 760 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 SSX2IPQ9Y2D8 614 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 TBC1D30Q9Y2I9 924 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 PAXBP1Q9Y5B6 917 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 SPEGQ15772 3267 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 AKAP13Q12802 2813 aa5.61□□□□□ -1.51
CALCOCO2-212ENST00000509014 ASPMQ8IZT6 3477 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 A0A087X1B8 175 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 hCG_1984214I3L0E3 225 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 PYCARD-AS1I3L0S3 204 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 DDX39AO00148 427 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MPPED1O15442 326 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 TEX28O15482 410 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 PEX1O43933 1283 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 RAMP2O60895 175 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 LRP3O75074 770 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 CSDE1O75534 798 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 DDHD2O94830 711 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 RETP07949 1114 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 DARSP14868 501 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 FOLR3P41439 243 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 PIK3CBP42338 1070 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MAGEA9P43362 315 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 RPS9P46781 194 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 GPC3P51654 580 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 CLCN3P51790 818 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MYO1EQ12965 1108 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MTAPQ13126 283 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 IMMTQ16891 758 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 PLA1AQ53H76 456 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 ARHGAP40Q5TG30 622 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 LAYNQ6UX15 382 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 GET4Q7L5D6 327 aaPredicted RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 RNF168Q8IYW5 571 aaPredicted RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 METTL13Q8N6R0 699 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 TOR1AIP2Q8NFQ8 470 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 GPR150Q8NGU9 434 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MAP4K1Q92918 833 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 CHFRQ96EP1 664 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 RPS6KC1Q96S38 1066 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 AGAP2Q99490 1192 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 SPZ1Q9BXG8 430 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 NAA15Q9BXJ9 866 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 CXorf36Q9H7Y0 433 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 ZNF302Q9NR11 478 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MRPL17Q9NRX2 175 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 SEMA4GQ9NTN9 838 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MARCH5Q9NX47 278 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 FOXJ2Q9P0K8 574 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 SERTAD3Q9UJW9 196 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 NDRG4Q9ULP0 352 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 MRPS17Q9Y2R5 130 aaKnown RBP5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 DMRT1Q9Y5R6 373 aa5.6□□□□□ -1.51
CALCOCO2-212ENST00000509014 IFIT3O14879 490 aaKnown RBP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 PPM1DO15297 605 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 PLEKHA8P1O95397 391 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 GLUD1P00367 558 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 XRCC6P12956 609 aaKnown RBP eCLIP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 RPL17P18621 184 aaKnown RBP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 AK2P54819 239 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 NXPH1P58417 271 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 NTHL1P78549 312 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 PTPRRQ15256 657 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 ANKRD45Q5TZF3 282 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 ICE2Q659A1 982 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 RGS7BPQ6MZT1 257 aaPredicted RBP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 CWC27Q6UX04 472 aaKnown RBP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 LRRC71Q8N4P6 559 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 SRBD1Q8N5C6 995 aaKnown RBP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 HDAC7Q8WUI4 952 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 RSPH1Q8WYR4 309 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 RILPL2Q969X0 211 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 SPSB4Q96A44 273 aa5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 RRP36Q96EU6 259 aaKnown RBP5.59□□□□□ -1.51
CALCOCO2-212ENST00000509014 FBXL20Q96IG2 436 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms