RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 RPN1P04843 607 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 LDHCP07864 332 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PEPDP12955 493 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 UNGP13051 313 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ENO3P13929 434 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 HOXB9P17482 250 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ATF3P18847 181 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PIK3CAP42336 1068 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF131P52739 623 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 CDH12P55289 794 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 GSCP56915 257 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 NUCB2P80303 420 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZBTB16Q05516 673 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 RNASELQ05823 741 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 WASHC5Q12768 1159 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 GRSF1Q12849 480 aaKnown RBP eCLIP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ILF3Q12906 894 aaKnown RBP eCLIP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TRAF3Q13114 568 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PMS2P11Q13670 270 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 GRM4Q14833 912 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 KRT72Q14CN4 511 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TAF11Q15544 211 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZSCAN26Q16670 478 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC35G1Q2M3R5 365 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TTC31Q49AM3 519 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 C5orf22Q49AR2 442 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM133BQ5BKY9 247 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM171A1Q5VUB5 890 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TTC19Q6DKK2 380 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 RINT1Q6NUQ1 792 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 HIBCHQ6NVY1 386 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 C16orf87Q6PH81 154 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC30A9Q6PML9 568 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 MON1BQ7L1V2 547 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC91Q7Z6B0 441 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 DPP9Q86TI2 863 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 LRRC49Q8IUZ0 686 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 NRSN1Q8IZ57 195 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TTC30BQ8N4P2 665 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TEX9Q8N6V9 391 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PAF1Q8N7H5 531 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ENDOVQ8N8Q3 282 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TEX19Q8NA77 164 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM184AQ8NB25 1140 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 LILRB1Q8NHL6 650 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TDRD7Q8NHU6 1098 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 CEP76Q8TAP6 659 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM110DQ8TAY7 271 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM163Q8TC26 289 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 FBXO17Q96EF6 278 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ADGRG7Q96K78 797 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 NEUROD6Q96NK8 337 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC25A33Q9BSK2 321 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SORBS1Q9BX66 1292 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF700Q9H0M5 742 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 IL25Q9H293 177 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 RWDD1Q9H446 243 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 VEZTQ9HBM0 779 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC7A10Q9NS82 523 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 HOXC10Q9NYD6 342 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 EPS15L1Q9UBC2 864 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PGAP2Q9UHJ9 254 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 POLG2Q9UHN1 485 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 XPO7Q9UIA9 1087 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZHX1Q9UKY1 873 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 GAB2Q9UQC2 676 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PKP3Q9Y446 797 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 KDRP35968 1356 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 KANK1Q14678 1352 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SMARCA2P51531 1590 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZBED9Q6R2W3 1325 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 IGKV3D-15A0A087WSY6 115 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 IGLV5-52A0A0A0MRZ9 124 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 IGHV4-28A0A0C4DH34 117 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 MBD3L5A6NJ08 208 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 KIF28PB7ZC32 967 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 CAND2O75155 1236 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 ERLIN1O75477 346 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 TCEA3O75764 348 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 BBOX1O75936 387 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 FGF18O76093 207 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 LARGE1O95461 756 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 APOHP02749 345 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 MMP3P08254 477 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 SKILP12757 684 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCNCP24863 283 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 EEF1GP26641 437 aaKnown RBP2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 HOXD10P28358 340 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 AKT1P31749 480 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 THPOP40225 353 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 USP8P40818 1118 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 PEX5P50542 639 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 GTF2A1P52655 376 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 SH3BGRP55822 239 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 ICA1Q05084 483 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 SNTA1Q13424 505 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 PDIA5Q14554 519 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF284Q2VY69 593 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 ALDH1L2Q3SY69 923 aa2.16□□□□□ -2.06
HMGB3P17-201ENST00000504195 STPG1Q5TH74 334 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms