RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TRIM72Q6ZMU5 477 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 MACC1Q6ZN28 852 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 RBM44Q6ZP01 1051 aaKnown RBP6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 PARS2Q7L3T8 475 aaKnown RBP6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 PTAR1Q7Z6K3 402 aaPredicted RBP6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 PASD1Q8IV76 773 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 ARL14Q8N4G2 192 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 OR7D4Q8NG98 312 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 ATL2Q8NHH9 583 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 WDR36Q8NI36 951 aaKnown RBP6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 IFI44Q8TCB0 444 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 MAPK15Q8TD08 544 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 EPS8L1Q8TE68 723 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 KCNE4Q8WWG9 221 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 TTC9Q92623 222 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 TMEM159Q96B96 161 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 TUBGCP2Q9BSJ2 902 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 TTYH3Q9C0H2 523 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 MPP6Q9NZW5 540 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 COX16Q9P0S2 106 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 OR12D3Q9UGF7 316 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 DACH1Q9UI36 760 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 AJAP1Q9UKB5 411 aaPredicted RBP6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 HPCAL4Q9UM19 191 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 NEU3Q9UQ49 428 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 CA5BQ9Y2D0 317 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 PCDHB1Q9Y5F3 818 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 ENTPD2Q9Y5L3 495 aa6.2□□□□□ -1.42
LSM3P4-201ENST00000502948 ANKRD36A6QL64 1941 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC187A0A096LP49 1063 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 C2CD4BA6NLJ0 364 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 B8ZZF3 427 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 F8VZ95 297 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 RAD51BO15315 384 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 FFAR2O15552 330 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 BNIP3LO60238 219 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 RAMP2O60895 175 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 SRGAP2O75044 1071 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TM7SF2O76062 418 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ITGB2P05107 769 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 MPOP05164 745 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ALPIP09923 528 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 UNGP13051 313 aaPredicted RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TGM2P21980 687 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 RBMS1P29558 406 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 SDC4P31431 198 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CCKBRP32239 447 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 GGCXP38435 758 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 MTIF2P46199 727 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CSNK1DP48730 415 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 THOP1P52888 689 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 PDX1P52945 283 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CLDN6P56747 220 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CLDN2P57739 230 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CXADRP78310 365 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CDR2Q01850 454 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 APBA1Q02410 837 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ELP6Q0PNE2 266 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC173Q0VFZ6 552 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 EIF2B5Q13144 721 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 PDE1CQ14123 709 aaPredicted RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ELOCQ15369 112 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 NR0B2Q15466 257 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 MYLK3Q32MK0 819 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 POM121L1PQ3SYA9 428 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 PARP15Q460N3 678 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TMEM52BQ4KMG9 183 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TRNP1Q6NT89 227 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ESRP1Q6NXG1 681 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 PPP1R2P3Q6NXS1 205 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 LINGO4Q6UY18 593 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TMC6Q7Z403 805 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TFAP2DQ7Z6R9 452 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 UMODL1-AS1Q8N2C9 162 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ARL10Q8N8L6 244 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 GRIN3AQ8TCU5 1115 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 SCG3Q8WXD2 468 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 MED8Q96G25 268 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 VCPIP1Q96JH7 1222 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 CFAP57Q96MR6 1250 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 GDAP1L1Q96MZ0 367 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ZNF641Q96N77 438 aaPredicted RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 SLC13A1Q9BZW2 595 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 PDCL3Q9H2J4 239 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 TNKS2Q9H2K2 1166 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 FZD3Q9NPG1 666 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 KCTD5Q9NXV2 234 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 IPO11Q9UI26 975 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 KLF15Q9UIH9 416 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 NOCTQ9UK39 431 aaKnown RBP6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 SATB2Q9UPW6 733 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 DGKBQ9Y6T7 804 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 KALRNO60229 2985 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 ATMQ13315 3056 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 KIF26BQ2KJY2 2108 aa6.19□□□□□ -1.42
LSM3P4-201ENST00000502948 A0A1W2PNU3 283 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 IGLON5A6NGN9 336 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 SIGLEC16A6NMB1 481 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 J3QKU1 62 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms