RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 OR3A3P47888 321 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 OR3A2P47893 321 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 THOP1P52888 689 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 MED22Q15528 200 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 BORAQ6PGQ7 559 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 FNDC11Q9BVV2 318 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 COLEC11Q9BWP8 271 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 CD248Q9HCU0 757 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 ERI2A8K979 691 aaKnown RBP11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 CD151P48509 253 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 CLK2P49760 499 aaKnown RBP11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 TAS2R41P59536 307 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 CBLBQ13191 982 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 PERM1Q5SV97 790 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 SWSAP1Q6NVH7 229 aa11.29□□□□□ -0.6
AC055713.1-201ENST00000498967 ADORA1P30542 326 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SLC1A2P43004 574 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 RGS19P49795 217 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 GALCP54803 685 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 XKR3Q5GH77 459 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 C1orf216Q8TAB5 229 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 C17orf75Q9HAS0 396 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 TM9SF3Q9HD45 589 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PCDHB6Q9Y5E3 794 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 RRN3P2A6NIE6 340 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 MLYCDO95822 493 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 NR2F1P10589 423 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 CCR3P51677 355 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 BEND5Q7L4P6 421 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 KLHL15Q96M94 604 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PAK6Q9NQU5 681 aaPredicted RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 DDIT4Q9NX09 232 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ABCD2Q9UBJ2 740 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 NAMPTP43490 491 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 MGAT5Q09328 741 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 NAT14Q8WUY8 206 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 MSANTD3Q96H12 275 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PIF1Q9H611 641 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ERBB3P21860 1342 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 EYA4O95677 639 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 RAG1P15918 1043 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 F8A1P23610 371 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ACAT1P24752 427 aaKnown RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 AIMP2Q13155 320 aaKnown RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 HMBOX1Q6NT76 420 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 TMEM184CQ9NVA4 438 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF175Q9Y473 711 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 FTH1P02794 183 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PCID2Q5JVF3 399 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 DNAJB7Q7Z6W7 309 aaPredicted RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 CEP76Q8TAP6 659 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 HPDLQ96IR7 371 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 KDM5CP41229 1560 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 CLDN25C9JDP6 229 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 KDM4BO94953 1096 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SLC16A8O95907 504 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SERPINA4P29622 427 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 KLHL35Q6PF15 583 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 CPNE1Q99829 537 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 NIF3L1Q9GZT8 377 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 TNKS2Q9H2K2 1166 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF451Q9Y4E5 1061 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 A0A087X1B8 175 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 CIB4A0PJX0 185 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 THEGLP0DJG4 465 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 IRF1P10914 325 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 TMEM44Q2T9K0 475 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 FAAH2Q6GMR7 532 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 RETSATQ6NUM9 610 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 SYT12Q8IV01 421 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PPP1R16AQ96I34 528 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 RSPH9Q9H1X1 276 aaPredicted RBP11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 VPS28Q9UK41 221 aa11.28□□□□□ -0.6
AC055713.1-201ENST00000498967 ACTL7BQ9Y614 415 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms