RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 BTN2A2Q8WVV5 523 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 NAT6Q93015 286 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 VOPP1Q96AW1 172 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 FAM81BQ96LP2 452 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 CCNL2Q96S94 520 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-212ENST00000498540 TRIM4Q9C037 500 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 CLPBQ9H078 707 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 WDR70Q9NW82 654 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.94□□□□□ -0.02
TRAF4-212ENST00000498540 HECAQ9UBI9 543 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-212ENST00000498540 SCN8AQ9UQD0 1980 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 LRP4O75096 1905 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 NTN3O00634 580 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-212ENST00000498540 YY2O15391 372 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 F9P00740 461 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ANXA6P08133 673 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 TSHRP16473 764 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 CLCN1P35523 988 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 KRT9P35527 623 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ACVRL1P37023 503 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 RPIAP49247 311 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 THOP1P52888 689 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 SNX16P57768 344 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 SLC20A2Q08357 652 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 NFATC3Q12968 1075 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 SRSF6Q13247 344 aaKnown RBP14.93□□□□□ -0.02
TRAF4-212ENST00000498540 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 LRRC73Q5JTD7 316 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 TRNP1Q6NT89 227 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 GBP6Q6ZN66 633 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ZDHHC17Q8IUH5 632 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ELOA2Q8IYF1 753 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-212ENST00000498540 RYBPQ8N488 228 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-212ENST00000498540 WDR48Q8TAF3 677 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ASB12Q8WXK4 309 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 GLMNQ92990 594 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 RAB7BQ96AH8 199 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 LIN37Q96GY3 246 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ZYG11BQ9C0D3 744 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 RABGEF1Q9UJ41 708 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 ATXN7L1Q9ULK2 861 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-212ENST00000498540 PADI4Q9UM07 663 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 PAXBP1Q9Y5B6 917 aa14.93□□□□□ -0.02
TRAF4-212ENST00000498540 LRRK1Q38SD2 2015 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 UGT2B4P06133 528 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 PON1P27169 355 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 SLC5A2P31639 672 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 FLT3P36888 993 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 PTK2BQ14289 1009 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 TCEA2Q15560 299 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 LINC00303Q3SY05 128 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 ZNF805Q5CZA5 627 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 FAM102AQ5T9C2 384 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-212ENST00000498540 MACC1Q6ZN28 852 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 FAM131BQ86XD5 332 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 KYQ8NBH2 561 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 TBATAQ96M53 351 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 HAPLN3Q96S86 360 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 SLC13A1Q9BZW2 595 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 SIX2Q9NPC8 291 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 MBNL1Q9NR56 388 aaKnown RBP14.92□□□□□ -0.02
TRAF4-212ENST00000498540 NDFIP2Q9NV92 336 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 AHCTF1Q8WYP5 2266 aa14.92□□□□□ -0.02
TRAF4-212ENST00000498540 UBR5O95071 2799 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-212ENST00000498540 PTPN13Q12923 2485 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 FOXN3O00409 490 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-212ENST00000498540 KRIT1O00522 736 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 PLD2O14939 933 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 AREL1O15033 823 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 NOBOXO60393 691 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 HGFP14210 728 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 TGIF1Q15583 401 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 EXOC3L4Q17RC7 722 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 C2CD6Q53TS8 623 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 ACBD5Q5T8D3 534 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-212ENST00000498540 FAXCQ5TGI0 409 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 ESRP1Q6NXG1 681 aaKnown RBP14.91□□□□□ -0.02
TRAF4-212ENST00000498540 LEKR1Q6ZMV7 388 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 BNIPLQ7Z465 357 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 XYLT1Q86Y38 959 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 CREBRFQ8IUR6 639 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 PLPP6Q8IY26 295 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 PCDH19Q8TAB3 1148 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 CCDC74AQ96AQ1 378 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 ISG20Q96AZ6 181 aaKnown RBP14.91□□□□□ -0.02
TRAF4-212ENST00000498540 CFAP57Q96MR6 1250 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 KLHL32Q96NJ5 620 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 FOXP3Q9BZS1 431 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 SIRPGQ9P1W8 387 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 GULP1Q9UBP9 304 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 PCDHGA7Q9Y5G6 932 aa14.91□□□□□ -0.02
TRAF4-212ENST00000498540 D6RAR5 112 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 MMP20O60882 483 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 ITIH2P19823 946 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 CDH5P33151 784 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 UGT1A5P35504 534 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 SCNN1AP37088 669 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms