RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.94□□□□□ -1.33e-10■□□□□ 9.5
VIM-207ENST00000495528 CACNA1IQ9P0X4 2223 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 CACNA1AO00555 2505 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 SF3B1O75533 1304 aaKnown RBP eCLIP6.94□□□□□ -1.3
VIM-207ENST00000495528 DOCK8Q8NF50 2099 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 OTOGLQ3ZCN5 2332 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 DNAH14Q0VDD8 3507 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 CENPVL1A0A0U1RR11 272 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 A0A1W2PPL8 197 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 CFAP69A5D8W1 941 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 CAPN8A6NHC0 703 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 SHISA7A6NL88 538 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 FAM227AF5H4B4 570 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 M0QYG6 137 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 KIF20AO95235 890 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 BAG4O95429 457 aaKnown RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 PEX11BO96011 259 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 HNRNPA1P09651 372 aaKnown RBP eCLIP6.93□□□□□ -1.3
VIM-207ENST00000495528 C6P13671 934 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 U2AF2P26368 475 aaKnown RBP eCLIP6.93□□□□□ -1.3
VIM-207ENST00000495528 HOXA9P31269 272 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 OR1D2P34982 312 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 AGFG1P52594 562 aaKnown RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 ATXN1P54253 815 aaKnown RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 CXADRP78310 365 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 MXRA7P84157 204 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 CEBPZQ03701 1054 aaKnown RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 ZNF844Q08AG5 666 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 CNN3Q15417 329 aaKnown RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 NAB2Q15742 525 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 PSMD5Q16401 504 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 ZNF528Q3MIS6 628 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 CRIP3Q6Q6R5 217 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 DBX2Q6ZNG2 339 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 MTSS1LQ765P7 747 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 ZBTB44Q8NCP5 570 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 FAM156AQ8NDB6 213 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 PROKR1Q8TCW9 393 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 PIGOQ8TEQ8 1089 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 ATRIPQ8WXE1 791 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 SCAMP4Q969E2 229 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 MYEOVQ96EZ4 313 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 MCRS1Q96EZ8 462 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 NAP1L4Q99733 375 aaKnown RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 KXD1Q9BQD3 176 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 POLR3FQ9H1D9 316 aaPredicted RBP6.93□□□□□ -1.3
VIM-207ENST00000495528 FZD8Q9H461 694 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 RLIMQ9NVW2 624 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 PCDHA12Q9UN75 941 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 HS3ST3A1Q9Y663 406 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 COL4A3Q01955 1670 aa6.93□□□□□ -1.3
VIM-207ENST00000495528 LRRIQ4A6NIV6 560 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 USO1O60763 962 aaKnown RBP6.92□□□□□ -1.3
VIM-207ENST00000495528 ABHD16AO95870 558 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 THP07101 528 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TACR2P21452 398 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TGM1P22735 817 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TOB1P50616 345 aaPredicted RBP6.92□□□□□ -1.3
VIM-207ENST00000495528 TP53BP2Q13625 1128 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 GBX1Q14549 363 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 GEN1Q17RS7 908 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 CD300LGQ6UXG3 332 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TPRG1Q6ZUI0 275 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 USP37Q86T82 979 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 ING5Q8WYH8 240 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 NELL1Q92832 810 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 CLDN23Q96B33 292 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 C8orf48Q96LL4 319 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TRIB1Q96RU8 372 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 SMOQ99835 787 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TINAGL1Q9GZM7 467 aaPredicted RBP6.92□□□□□ -1.3
VIM-207ENST00000495528 PDZD7Q9H5P4 517 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 TTC12Q9H892 705 aaPredicted RBP6.92□□□□□ -1.3
VIM-207ENST00000495528 GPR35Q9HC97 309 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 HEBP1Q9NRV9 189 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 PRMT7Q9NVM4 692 aaPredicted RBP6.92□□□□□ -1.3
VIM-207ENST00000495528 ZSCAN32Q9NX65 697 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 KCNE5Q9UJ90 142 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 CLIC4Q9Y696 253 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 CDY1Q9Y6F8 540 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 DOCK6Q96HP0 2047 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 NCOR2Q9Y618 2525 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 ZMYM2Q9UBW7 1377 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 ZNF292O60281 2723 aa6.92□□□□□ -1.3
VIM-207ENST00000495528 CEP250Q9BV73 2442 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 TOR1BO14657 336 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 TPP1O14773 563 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 ECI2O75521 394 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 B3GAT3O94766 335 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 ZFPL1O95159 310 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 EDN1P05305 212 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 XRCC6P12956 609 aaKnown RBP eCLIP6.91□□□□□ -1.3
VIM-207ENST00000495528 CHRM3P20309 590 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 MAGEA9P43362 315 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 CLCNKBP51801 687 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 MC2RQ01718 297 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 PIGFQ07326 219 aa6.91□□□□□ -1.3
VIM-207ENST00000495528 ELAVL2Q12926 359 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms