RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 CD300AQ9UGN4 299 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 SLCO1B7G3V0H7 640 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 GPC4O75487 556 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 SNAP29O95721 258 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 PIGRP01833 764 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 TNNC2P02585 160 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 FASP25445 335 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 PTGER2P43116 358 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 AP3M2P53677 418 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 ZBTB17Q13105 803 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 MAPK11Q15759 364 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 SCUBE3Q8IX30 993 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTK7-218ENST00000493339 OR13F1Q8NGS4 319 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 LRCH3Q96II8 777 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 CSF3RQ99062 836 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 HGH1Q9BTY7 390 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 MROQ9BYG7 248 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 POLE4Q9NR33 117 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 GGA3Q9NZ52 723 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 TMEM9Q9P0T7 183 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 ADAM28Q9UKQ2 775 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 PSME2Q9UL46 239 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
PTK7-218ENST00000493339 TRAF6Q9Y4K3 522 aa13.32□□□□□ -0.28
PTK7-218ENST00000493339 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 CLDN25C9JDP6 229 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 UBDO15205 165 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 DLX3O60479 287 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 OXTRP30559 389 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 USP10Q14694 798 aaKnown RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 GRM3Q14832 879 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 ZIK1Q3SY52 487 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 PYROXD2Q8N2H3 581 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 FSTL5Q8N475 847 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 TMEM176AQ96HP8 235 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 APOL2Q9BQE5 337 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 NAT9Q9BTE0 207 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 V9GYQ6 96 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 PTPRFP10586 1907 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 ATP6AP2A0A1C7CYW4 349 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 FAM47E-STBD1D6RA91 191 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 ATP6AP2O75787 350 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 DDHD2O94830 711 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 IL10P22301 178 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 OCA2Q04671 838 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 CAPSQ13938 189 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 INAQ16352 499 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 INTS11Q5TA45 600 aaKnown RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 DDIASQ8IXT1 998 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 SGCDQ92629 289 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 POM121Q96HA1 1249 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 SH3YL1Q96HL8 342 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 LHPPQ9H008 270 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 VTA1Q9NP79 307 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 SCHIP1Q9P0W5 487 aaPredicted RBP13.31□□□□□ -0.28
PTK7-218ENST00000493339 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 TLL2Q9Y6L7 1015 aa13.31□□□□□ -0.28
PTK7-218ENST00000493339 NEMP2A6NFY4 417 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 TRIM64A6NGJ6 449 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 C9JVG2 144 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
PTK7-218ENST00000493339 CABYRO75952 493 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
PTK7-218ENST00000493339 HOXC6P09630 235 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 YBX3P16989 372 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTK7-218ENST00000493339 GOT1P17174 413 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 CYP3A5P20815 502 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 PSMD8P48556 350 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 PPIL2Q13356 520 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 SPCS2Q15005 226 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 TIGD2Q4W5G0 525 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 SPANXN3Q5MJ09 141 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 TMEM151AQ8N4L1 468 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTK7-218ENST00000493339 CSPG4P5Q96PW8 444 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 ZNF347Q96SE7 839 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 DGCR6LQ9BY27 220 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 B3GNT5Q9BYG0 378 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 IL22Q9GZX6 179 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 ADNPQ9H2P0 1102 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
PTK7-218ENST00000493339 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms