RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NCKIPSDQ9NZQ3 722 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 FADS3Q9Y5Q0 445 aa16.81■□□□□ 0.28
PDLIM2-217ENST00000491330 C10orf142B7Z368 130 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 WNT9AO14904 365 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 TMCC1O94876 653 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 TPM1P09493 284 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 ZBED6P86452 979 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 RAB6CQ53S08 254 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 BOLA3Q53S33 107 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 TMCO4Q5TGY1 634 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 Q6ZSR6 202 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 PARS2Q7L3T8 475 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 TMEM145Q8NBT3 493 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 DENND6BQ8NEG7 585 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 OR6K2Q8NGY2 324 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 BTN2A2Q8WVV5 523 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 LENG8Q96PV6 779 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 CPEB1Q9BZB8 566 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 RAB6CQ9H0N0 254 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 SP110Q9HB58 689 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 DNAJC28Q9NX36 388 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 MYO1AQ9UBC5 1043 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 PCSK1NQ9UHG2 260 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 LUC7L2Q9Y383 392 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 MFHAS1Q9Y4C4 1052 aa16.8■□□□□ 0.28
PDLIM2-217ENST00000491330 TCRBV5S1A1TA0A578 114 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 TMEM191CA6NGB0 347 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF821O75541 412 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 TM7SF2O76062 418 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 RENBPP51606 427 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 POLR2LP62875 67 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 BNIP3Q12983 259 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF211Q13398 564 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 PIGHQ14442 188 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 TMEM259Q4ZIN3 620 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 PPP6R3Q5H9R7 873 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 SEL1L3Q68CR1 1132 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 DHRS13Q6UX07 377 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 KYAT3Q6YP21 454 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 LEKR1Q6ZMV7 388 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 SPATS2Q86XZ4 545 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 ATL2Q8NHH9 583 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 GLMNQ92990 594 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 HMCESQ96FZ2 354 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF641Q96N77 438 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 C1QTNF2Q9BXJ5 285 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 HAUS2Q9NVX0 235 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 DKK3Q9UBP4 350 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 CAPN11Q9UMQ6 739 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 PCNX2A6NKB5 2137 aa16.79■□□□□ 0.28
PDLIM2-217ENST00000491330 H3BRJ5 948 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 PALMO75781 387 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 KRT37O76014 449 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 SERPING1P05155 500 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 SERPINA4P29622 427 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 PCK1P35558 622 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 HCAR3P49019 387 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 RFX8Q6ZV50 586 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 ABI3BPQ7Z7G0 1075 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 PARGQ86W56 976 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 OR13H1Q8NG92 308 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 TUBGCP5Q96RT8 1024 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 CINPQ9BW66 212 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 ABCG4Q9H172 646 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 ATP13A3Q9H7F0 1226 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 FZD3Q9NPG1 666 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 LCMT1Q9UIC8 334 aa16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 ZFR2Q9UPR6 939 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-217ENST00000491330 IGLON5A6NGN9 336 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 TMEM110-MUSTN1A8MSY1 372 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 DFFAO00273 331 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 SDC3O75056 442 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 DKK1O94907 266 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 CD160O95971 181 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 DGKAP23743 735 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 BLKP51451 505 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 CLDN2P57739 230 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 YPEL5P62699 121 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 NUMA1Q14980 2115 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 HADHQ16836 314 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 ATXN7L2Q5T6C5 722 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 SCG3Q8WXD2 468 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 TMEM121BQ9BXQ6 578 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 TAS2R14Q9NYV8 317 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 IP6K2Q9UHH9 426 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 CA5BQ9Y2D0 317 aa16.77■□□□□ 0.28
PDLIM2-217ENST00000491330 CHD5Q8TDI0 1954 aa16.77■□□□□ 0.27
PDLIM2-217ENST00000491330 A0A1W2PQ67 120 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SRRM3A6NNA2 597 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 PRAMEF11O60813 436 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SKILP12757 684 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 KRT10P13645 584 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms