RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ATG13O75143 517 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 EPOP01588 193 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 PRNPP04156 253 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 APRTP07741 180 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 NFKBIAP25963 317 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 TIE1P35590 1138 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 IL12RB1P42701 662 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 MRPS25P82663 173 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 SKOR1P84550 965 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 ZXDAP98168 799 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 BCL2L1Q07817 233 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 NIPAL4Q0D2K0 466 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 ELAVL3Q14576 367 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 ATXN7L2Q5T6C5 722 aaPredicted RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 HIBCHQ6NVY1 386 aaPredicted RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 Q6ZVU0 165 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 PRPF39Q86UA1 669 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 SIX5Q8N196 739 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 HCAR2Q8TDS4 363 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 CPT1BQ92523 772 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 IFT43Q96FT9 208 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 FEM1CQ96JP0 617 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 EXOC2Q96KP1 924 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 ZNF641Q96N77 438 aaPredicted RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 RBM15Q96T37 977 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNX12-205ENST00000490561 GABRG3Q99928 467 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 IER2Q9BTL4 223 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 FSD1LQ9BXM9 530 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 TM6SF2Q9BZW4 377 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 NOD2Q9HC29 1040 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 XAB2Q9HCS7 855 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 MTRF1LQ9UGC7 380 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 MUTYHQ9UIF7 546 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 NDRG2Q9UN36 371 aaKnown RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 MIA3Q5JRA6 1907 aa13.4□□□□□ -0.26
SNX12-205ENST00000490561 MUC22E2RYF6 1773 aaPredicted RBP13.4□□□□□ -0.26
SNX12-205ENST00000490561 KRBA1A5PL33 1030 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 RNASEH1O60930 286 aaKnown RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 EPHX1P07099 455 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 MMP2P08253 660 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 MLNP12872 115 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 MAGEA9P43362 315 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 RGRP47804 291 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 ITGA8P53708 1063 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 SEC13P55735 322 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 RPL26P61254 145 aaKnown RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 ERCC6LQ2NKX8 1250 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 IER5LQ5T953 404 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 FAXCQ5TGI0 409 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 ARMC3Q5W041 872 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 KCTD11Q693B1 232 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 WDR93Q6P2C0 686 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 KDELC1Q6UW63 502 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 DPY19L3Q6ZPD9 716 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 SFTPA1Q8IWL2 248 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 NAT8LQ8N9F0 302 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 EZH1Q92800 747 aaPredicted RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 ART4Q93070 314 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 TBL1YQ9BQ87 522 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 MLPHQ9BV36 600 aaPredicted RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 ADGRE3Q9BY15 652 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 PHACTR1Q9C0D0 580 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 CACNA2D2Q9NY47 1150 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 IL36AQ9UHA7 158 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 EVLQ9UI08 416 aaPredicted RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 RPL26L1Q9UNX3 145 aaKnown RBP13.39□□□□□ -0.27
SNX12-205ENST00000490561 RAI2Q9Y5P3 530 aa13.39□□□□□ -0.27
SNX12-205ENST00000490561 CHURC1-FNTBB4DL54 471 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 BNIP3LO60238 219 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 RNF40O75150 1001 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 SIN3BO75182 1162 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 PPFIA2O75334 1257 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 PMPCBO75439 489 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 MT-CYBP00156 380 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 CHRNB1P11230 501 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 PRKCHP24723 683 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 WNT3AP56704 352 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 CDK18Q07002 472 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 SIGLEC14Q08ET2 396 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 SFSWAPQ12872 951 aaKnown RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 CAMK2GQ13555 558 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 HLTFQ14527 1009 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX12-205ENST00000490561 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms